| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 924,324:1 | +A | 7.3% | coding (872/2169 nt) | PP_0804 ← | protein secretion ABC transporter permease/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 924,324 | 1 | . | A | 7.3% | 466.3 / 31.6 | 123 | coding (872/2169 nt) | PP_0804 | protein secretion ABC transporter permease/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (62/52); new base A (4/5); total (66/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.48e-01 | |||||||||||
Only 100 of 126 total aligned reads displayed.
GGCCAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGGCGCGCTT > NC_002947/924176‑924469 | ggCCAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTcg‑c < 1:507429/150‑1 (MQ=255) ccAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑Cgg < 1:1222619/150‑1 (MQ=255) cAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGAAGGTCGGCCAGCAATGGCG‑CGGt > 1:1179464/1‑150 (MQ=255) cGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTg < 1:1153892/150‑1 (MQ=255) tGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGa > 2:2216873/1‑150 (MQ=255) ggCCAGGCGCCTTTGTGCAAGCACCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCCGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGTCCAGCACCG‑CGACGGT‑GCTggc < 2:2345376/149‑2 (MQ=255) gCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGCGA‑CGGT‑GCTggcc < 2:100580/150‑3 (MQ=255) ggCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGa < 1:440144/150‑1 (MQ=255) tgtgCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcg < 2:465230/150‑1 (MQ=255) tgCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcgcg > 2:463487/1‑150 (MQ=255) gcaagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTcg‑cg > 1:2407585/1‑126 (MQ=255) gcaagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTcg‑cg < 2:2407585/126‑1 (MQ=255) caagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTGCGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCACGTCGGCAAGCACCGTCG‑TGGT‑GCTGGACGTGATCAGGTCGCggc > 2:795425/1‑149 (MQ=255) caagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGa < 1:65793/150‑1 (MQ=255) caagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCG‑CGACGGT‑GCTgg > 2:717603/1‑132 (MQ=255) caagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCG‑CGACGGT‑GCTgg < 1:717603/132‑1 (MQ=255) aagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGAt > 2:1578455/1‑150 (MQ=255) agcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATc > 2:349043/1‑150 (MQ=255) agcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCG‑CGACGGT‑GCTggc < 1:131300/131‑2 (MQ=255) agcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCG‑CGACGGT‑GCTggc > 2:131300/1‑130 (MQ=255) gcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGAtag > 1:687921/1‑148 (MQ=255) gcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGACAGGACCCTCT‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCg > 2:564489/1‑150 (MQ=255) aCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGa < 2:1063322/127‑1 (MQ=255) aCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGa > 1:1063322/1‑127 (MQ=255) aCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATc > 2:612183/1‑146 (MQ=255) aCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATc < 1:612183/146‑1 (MQ=255) accGGGTAGCACAATGGACAGCAGCGCGACCAGAGGGATGAACACCAGTACGCGGCCGACCAGCCAGAACACGAACAGGAACTGGAGTAAGAACGGCAGGTCGGCCAGCACTGTCG‑CGGT‑GATGGACGTGATCAGGTCGCGGGTCGACTc > 2:1036370/2‑150 (MQ=255) agcaCCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTcg > 2:1194391/1‑150 (MQ=255) agcaCCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGCGA‑CGGT‑GCTgg > 2:775476/1‑118 (MQ=255) agcaCCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCG‑CGACGGT‑GCTgg < 1:775476/118‑1 (MQ=255) gCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGAACCG‑GG‑CTGTAGGTTGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGc > 2:1638396/1‑150 (MQ=255) ccAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcgc > 1:653546/1‑123 (MQ=255) ccAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcgc < 2:653546/123‑1 (MQ=255) ccAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCg > 2:1742523/1‑150 (MQ=255) cagcagCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAGCACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCga < 1:1036370/150‑1 (MQ=255) cagcagCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCga > 1:1041944/1‑150 (MQ=255) cagcagCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCga > 2:374821/1‑150 (MQ=255) cagcGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcgc < 2:2176606/119‑1 (MQ=255) cagcGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTcgc > 1:2176606/1‑119 (MQ=255) agcGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCCGCTCGCGCAACTGCGAGATg > 1:827829/1‑150 (MQ=255) gcgACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc < 1:349043/150‑1 (MQ=255) gcgACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCAAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc < 1:21267/150‑1 (MQ=255) cGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCgg < 2:189206/109‑1 (MQ=255) cGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCgg > 1:189206/1‑109 (MQ=255) cGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGt < 2:1753466/150‑1 (MQ=255) aaCACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCCGCGCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTg > 1:500725/1‑150 (MQ=255) aaCACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTg < 1:791795/150‑1 (MQ=255) acacCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTgg > 1:318748/1‑150 (MQ=255) ccAGTACGCCGCCGATCAGCCAGAACACGAAAAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACAGCGAGATGAACGAGCCGGTGGACTTGGGcc < 2:236572/150‑1 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCa > 1:2445556/1‑89 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCa < 2:2445556/89‑1 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCg > 2:1229152/1‑122 (MQ=255) aGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGc > 2:1483303/1‑150 (MQ=255) aGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCACAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGc > 1:1438748/1‑150 (MQ=255) tACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCAc > 2:1555090/1‑150 (MQ=255) gccgccGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTc < 1:1596387/105‑1 (MQ=255) cgccgATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGAc > 2:1272826/1‑74 (MQ=255) cgccgATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGAc < 1:1272826/74‑1 (MQ=255) gccgATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGtt > 2:1138051/1‑150 (MQ=255) cgATCAGCCAGAACACGAACAGGAACACGAGGTAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgc < 2:301509/150‑1 (MQ=255) gATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGaa < 2:358933/117‑1 (MQ=255) aTCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgc < 1:2130939/150‑1 (MQ=255) tCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTAGAACTGGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgca > 1:25380/1‑150 (MQ=255) ccAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCAAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcg > 2:1600234/1‑150 (MQ=255) cAGAACACGAACAGGAACAGAAGGAAAAACGGGAGGTCATCCAGCACCGTCG‑CGGT‑GCTGGGCGTGAGCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgc > 2:1727922/1‑150 (MQ=255) aGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCGGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgca > 1:1727022/1‑150 (MQ=255) aGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgca > 1:1548399/1‑150 (MQ=255) gAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCCGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgcag < 2:39187/150‑1 (MQ=255) gAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgcag < 1:1884400/150‑1 (MQ=255) aaCACGACCAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCCGGGTGG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGAAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGcgcaggcgcagg < 1:1321085/150‑1 (MQ=255) aaCACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGcgcaggcgcagg > 1:2020800/1‑150 (MQ=255) aaCACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGcgcaggcgcagg < 1:445296/150‑1 (MQ=255) aaCACGAACAGGAACAGCAGGAAGAACGGAAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGcgcaggcgcagg > 2:441754/1‑150 (MQ=255) acGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCAcc > 1:1833529/1‑129 (MQ=255) acaggaacagCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGc < 2:1871928/150‑1 (MQ=255) gaacagCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTa > 1:1590775/1‑150 (MQ=255) gaacagCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGACTTGCGCAGGCGCAGGGCATGGCCGTa < 1:1012742/150‑1 (MQ=255) acagCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATg > 1:489134/1‑92 (MQ=255) acagCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATg < 2:489134/92‑1 (MQ=255) cagGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAg > 2:1214100/1‑150 (MQ=255) agGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAgg > 2:1588856/1‑150 (MQ=255) agGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAgg < 1:1578455/150‑1 (MQ=255) ggAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCg > 1:469546/1‑140 (MQ=255) ggAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCg < 2:469546/140‑1 (MQ=255) gaagaaCGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc > 2:195691/1‑88 (MQ=255) gaagaaCGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc < 1:195691/88‑1 (MQ=255) ggTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATACGGTGCAGGAGGGTCAAGTGTACTCACAACTGCTAGTTGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGAGCAGGTCGCTCACCCGCa > 1:46025/1‑150 (MQ=255) gTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCga > 2:1795174/1‑69 (MQ=255) gTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCga < 1:1795174/69‑1 (MQ=255) gTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAg > 1:2353285/1‑150 (MQ=255) gTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGCGCATGGCCGTAGACCAGGTCGCTCACCCGCAg < 2:1349183/150‑1 (MQ=255) cacgtccAGCACCG‑CGACGGT‑GCTGGCCGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAg > 2:1570549/6‑150 (MQ=255) gtccAGCACCG‑CGACGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGtt < 1:297502/100‑1 (MQ=255) gtccAGCACCG‑CGACGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGtt > 2:297502/3‑102 (MQ=255) gCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGCAACATCCTTTCTCAACTTCTAGATGAACGAGCAGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCg < 1:1742523/150‑1 (MQ=255) aGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGgcg > 2:1657675/1‑150 (MQ=255) aGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGgcg > 2:1657629/1‑150 (MQ=255) gCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGCGCCGGGGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGgcgc < 1:287877/150‑1 (MQ=255) cACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGgcgcg > 1:1175924/1‑150 (MQ=255) aCCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAgg > 1:412289/1‑126 (MQ=255) | GGCCAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAGCACCGTCG‑CGGT‑GCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGGCGCGCTT > NC_002947/924176‑924469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |