| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,232,739:1 | +T | 6.8% | intergenic (‑21/+196) | glpD ← / ← glpR | aerobic glycerol‑3‑phosphate dehydrogenase/DNA‑binding transcriptional repressor GlpR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,232,739 | 1 | . | T | 6.8% | 279.5 / 14.7 | 73 | intergenic (‑21/+196) | glpD/glpR | aerobic glycerol‑3‑phosphate dehydrogenase/DNA‑binding transcriptional repressor GlpR |
| Reads supporting (aligned to +/- strand): ref base . (30/38); new base T (3/2); total (33/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
GAAGACCTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGGCGCT > NC_002947/1232590‑1232888 | gAAGACCTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTcaca > 2:1354926/1‑150 (MQ=255) aGACCTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑Tc < 2:2436828/150‑1 (MQ=255) aGACCTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑Tc > 1:199994/1‑150 (MQ=255) ccTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGaa > 2:1372428/1‑150 (MQ=255) cTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAt > 2:1011704/1‑150 (MQ=255) tCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAtgt > 2:999596/1‑150 (MQ=255) cAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAtgtg < 1:1258274/150‑1 (MQ=255) cAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAtgtg > 1:805532/1‑150 (MQ=255) aGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGaa < 1:2434953/150‑1 (MQ=255) aGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGCACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGaa < 1:1011704/150‑1 (MQ=255) gACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGa < 1:2083876/150‑1 (MQ=255) aCCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGAt < 2:821561/150‑1 (MQ=255) ccAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACATTCG‑ATGTGAACa < 1:1178847/144‑1 (MQ=255) ccAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACATTCG‑ATGTGAACa > 2:1178847/1‑144 (MQ=255) aGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCCAGGTCATAGCAGTTGGCTGTAGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGtt > 1:685161/1‑150 (MQ=255) gcggcgTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTc < 1:228290/150‑1 (MQ=255) gcggcgTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTc < 2:199994/150‑1 (MQ=255) gcggcgTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTc < 2:2122720/150‑1 (MQ=255) ggcgTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGTGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGt < 1:2017230/150‑1 (MQ=255) gcgTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGtt > 1:956452/1‑150 (MQ=255) gCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGaa < 2:129551/150‑1 (MQ=255) ggCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGaaaa < 2:1411910/149‑1 (MQ=255) gATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAatat > 1:869838/1‑150 (MQ=255) tGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCCTAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGACGTTCGTTTGCGAAAATATTa < 1:1206215/150‑1 (MQ=255) tGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTa < 2:805532/150‑1 (MQ=255) cACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAgcgc > 1:1789844/1‑150 (MQ=255) cACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGATGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TC‑AATGTTCACAttcgatg > 1:1548477/1‑122 (MQ=255) aTTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGa > 2:590995/1‑150 (MQ=255) aTTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGa > 1:1188287/1‑150 (MQ=255) cgccgATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGc > 2:2020857/1‑150 (MQ=255) gATTACGGCAAGGTCATAGCAGTTAAAAGACTGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagt > 1:1242625/1‑150 (MQ=255) aTTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagtc < 2:1188287/150‑1 (MQ=255) ttACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagtca > 2:2069443/1‑150 (MQ=255) aCGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCGTCTTGAGGCTGTTCCCA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagtcagt < 1:1354926/150‑1 (MQ=255) ggCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGCAAATATGAGCGCAACAGAACGCCGGTCGCCAATCAGtct > 2:787592/1‑150 (MQ=255) ggTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCtata < 1:6109/150‑1 (MQ=255) tAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAAAGCCTGTCGCCAGTCAGTCTCTATAGaaaa < 1:2277989/150‑1 (MQ=255) gCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagt > 1:1394616/1‑132 (MQ=255) gCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCcagt < 2:1394616/132‑1 (MQ=255) gCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGaaaaaa > 1:710106/1‑150 (MQ=255) cAGTTGGGTGTTGGGGGCTAGGACGAAACAGGCTGGGAAATGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAATATTGATGTTCGTTTGCGAAAATATTAGAGCGACAGGACGCGGGTCGCCAGTCAGTCGCTATATaatgaac < 2:972870/150‑6 (MQ=255) cAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAAc > 2:976429/1‑150 (MQ=255) tGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGAt < 1:410943/150‑1 (MQ=255) tGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCaaa < 1:735518/150‑1 (MQ=255) ttGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAtgt < 2:203143/66‑1 (MQ=255) ttGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAAtgt > 1:203143/1‑66 (MQ=255) ggggCTGGGACGAAAATGGCTGGGACACGGGCAAGGCCTCCTGGCGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCCGCCAGTCTCTATAGAACAAACGAATAAAACGACa > 2:290304/1‑150 (MQ=255) gggCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACaa < 1:999596/150‑1 (MQ=255) cGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGaa < 1:714811/150‑1 (MQ=255) gAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGa > 2:2204662/1‑120 (MQ=255) gAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGa < 1:2204662/120‑1 (MQ=255) gAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGa < 2:114844/129‑1 (MQ=255) gAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGa > 1:114844/1‑129 (MQ=255) gAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGAGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAAc < 2:742716/150‑1 (MQ=255) aaCTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACAt > 2:40855/1‑150 (MQ=255) ggctggGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTAc < 1:1019886/150‑1 (MQ=255) ggACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGaaaa < 2:710106/150‑1 (MQ=255) ggCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAggg < 1:1372428/150‑1 (MQ=255) aaGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGt > 2:110590/1‑150 (MQ=255) aGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTa < 1:590995/150‑1 (MQ=255) ggCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCTAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTAc < 2:685161/150‑1 (MQ=255) gCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGaa > 2:41098/1‑125 (MQ=255) gCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGaa < 1:41098/125‑1 (MQ=255) cctcctGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACgg > 2:2112788/1‑150 (MQ=255) cctGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCtt < 2:1789844/150‑1 (MQ=255) ggCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTg > 1:303986/1‑150 (MQ=255) caatGTTCACATTCG‑ATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTgg > 1:1957186/4‑147 (MQ=255) caatGTTCACA‑TTCGATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTgg < 2:1957186/144‑1 (MQ=255) gCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGa < 1:2020857/150‑1 (MQ=255) atGTTCACA‑TTCGATGTGAACATTCATGTTCGTTTGCTAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCACATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAg > 1:2017952/2‑150 (MQ=255) tGTTCACATTCG‑ATGCGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCta > 2:378010/1‑80 (MQ=255) tGTTCACATTCG‑ATGCGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCta < 1:378010/80‑1 (MQ=255) tGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAgg < 1:40855/150‑1 (MQ=255) gTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAggg > 2:1670462/1‑150 (MQ=255) caca‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGgc < 1:341383/150‑1 (MQ=255) aca‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGgcg > 1:1194524/1‑150 (MQ=255) ca‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGgcgc > 1:1867443/1‑150 (MQ=255) a‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGGCGCt > 1:914226/1‑150 (MQ=255) | GAAGACCTTCAAGCCGCGACCAGCGGCGTCGGCAGCGATGCCCACGCCATTGATGCCACCGCCGATTACGGCAAGGTCATAGCAGTTGGCTGTTGGGGGCTGGGACGAAACTGGCTGGGACACGGGCAAGGCCTCCTGAGGCTGTTCACA‑TCGAATGTGAACATTGATGTTCGTTTGCGAAAATATTAGCGCAACAGAACGCCGGTCGCCAGTCAGTCTCTATAGAAAAAACTGATCAAATGACAATGAAGTGAACATTTACGAAAATTCAGGGGGTACGGCTTGGGTGAGGGGGCGCT > NC_002947/1232590‑1232888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |