| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,778,768:1 | +G | 6.0% | coding (633/924 nt) | PP_2431 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,778,768 | 1 | . | G | 6.0% | 338.0 / 14.4 | 83 | coding (633/924 nt) | PP_2431 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (42/36); new base G (2/3); total (44/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
ATCAATTCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTT > NC_002947/2778625‑2778917 | aTCAATTCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACCACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCAccgtgcag < 2:1213802/150‑7 (MQ=255) ttCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCg < 2:2121919/150‑1 (MQ=255) ttCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCg > 2:196789/1‑150 (MQ=255) ttCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCg < 1:1300828/150‑1 (MQ=255) gCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCGTGCA‑GGTGCgtgggc < 2:1386762/150‑6 (MQ=255) cAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTAcc < 1:2143199/150‑1 (MQ=255) cAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGACACCCTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTACCGAGCGGCCCGCGCACC‑TGCACGGTGCGGTTAcc < 1:2019084/150‑1 (MQ=255) gACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCaa > 2:166526/1‑150 (MQ=255) gACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCaa > 1:2248483/1‑150 (MQ=255) cGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACt < 1:727617/150‑1 (MQ=255) gATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTg > 2:1362792/1‑150 (MQ=255) tttCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACCGcc > 1:1372558/1‑150 (MQ=255) ttCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCa < 1:360017/150‑1 (MQ=255) gTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTATAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGt > 1:1584282/1‑150 (MQ=255) ttCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTc > 1:1677054/1‑150 (MQ=255) ttCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTc < 2:49997/150‑1 (MQ=255) gCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCg < 1:2203918/122‑1 (MQ=255) gCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCg > 2:2203918/1‑122 (MQ=255) gCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACAcc > 2:159743/1‑150 (MQ=255) gcgcTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGtgctgc < 1:159743/150‑1 (MQ=255) gcTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCAt > 1:1050368/1‑150 (MQ=255) cTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATg < 1:2349181/150‑1 (MQ=255) tGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGt > 1:2233769/1‑150 (MQ=255) aCATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTAc > 1:805567/1‑150 (MQ=255) aTCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCGTGCA‑GGTGCgtgg > 1:1494828/1‑102 (MQ=255) aTCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACCGTGCA‑GGTGCgtgg < 2:1494828/105‑4 (MQ=255) ccACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCACACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACa > 2:448371/1‑150 (MQ=255) ccACGACGTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCACACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACa < 1:448371/150‑1 (MQ=255) aCGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCa < 1:182924/109‑1 (MQ=255) aCGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCa > 2:182924/1‑109 (MQ=255) cGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGc < 1:1080310/150‑1 (MQ=255) aCTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCAt > 2:2054218/1‑150 (MQ=255) gACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGCCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCAtgctgctg < 1:1213859/150‑1 (MQ=255) aCGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGGGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCAtgctgctgc > 1:2375478/1‑150 (MQ=255) aCGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTAGGCATCGTTACTGACCAGCGGCCCACTCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCAtgctgctgc > 2:627549/1‑150 (MQ=255) tACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTAcagca > 2:724355/1‑129 (MQ=255) tACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTAcagca < 1:724355/129‑1 (MQ=255) cTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGt > 1:332460/1‑150 (MQ=255) cTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGt > 2:640908/1‑150 (MQ=255) cTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGt > 2:1601674/1‑150 (MQ=255) ttCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCCCGCACCGTGCA‑GGTGCgtg > 1:1105788/1‑75 (MQ=255) ttCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAAc < 1:169274/85‑1 (MQ=255) ttCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAAc > 2:169274/1‑85 (MQ=255) gtCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCCCGCACCGTGCA‑GGTGCgtg < 2:1105788/76‑3 (MQ=255) atCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTc > 2:1174706/2‑150 (MQ=255) cccccTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCgg < 1:981465/150‑1 (MQ=255) ccccTGGATGGCCCGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCggg < 2:846561/150‑1 (MQ=255) cccTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCgggg < 1:2087286/150‑1 (MQ=255) cccTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCgggg < 2:1584282/150‑1 (MQ=255) ccAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGt > 2:326676/1‑105 (MQ=255) ccAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGt < 1:326676/105‑1 (MQ=255) aGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAgcgggcgg > 1:65704/1‑150 (MQ=255) ggATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGc > 1:398781/1‑150 (MQ=255) gATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCg > 1:1074510/1‑150 (MQ=255) gtgccGTCGGCATCGTCACTGACCAGCGGCCGACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCgg < 2:2154843/146‑1 (MQ=255) aTGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCgg < 2:332460/150‑1 (MQ=255) aCGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGcc < 2:65704/150‑1 (MQ=255) gTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAg > 2:1708065/1‑150 (MQ=255) tCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAgg < 2:2233769/150‑1 (MQ=255) tCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAgg < 1:1708065/150‑1 (MQ=255) ggCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTa > 2:376977/1‑150 (MQ=255) gCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAg > 2:115080/1‑150 (MQ=255) gCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAg > 1:1832028/1‑150 (MQ=255) tCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCg < 2:376930/150‑1 (MQ=255) tCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCg < 2:2248483/150‑1 (MQ=255) cGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTc > 2:1926376/1‑148 (MQ=255) cGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTc < 1:1926376/148‑1 (MQ=255) cGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCgg < 1:677091/150‑1 (MQ=255) gTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCggg > 1:2249200/1‑150 (MQ=255) gTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGGAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCggg > 2:814510/1‑150 (MQ=255) cTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACCGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAg < 1:166526/150‑1 (MQ=255) tGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAgg > 2:2144076/1‑150 (MQ=255) aCCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCgggg < 1:731562/108‑1 (MQ=255) aCCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCgggg > 2:731562/1‑108 (MQ=255) aCCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGcc < 1:2054218/150‑1 (MQ=255) aCCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGcc > 2:598198/1‑150 (MQ=255) cAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGccac > 1:1055005/1‑150 (MQ=255) aGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGccacc > 1:1455833/1‑150 (MQ=255) gCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGAGAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGccacca > 2:1658545/1‑150 (MQ=255) gCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGccacca < 1:1362792/150‑1 (MQ=255) gCCCACGCACC‑TGCACGGTGCTGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCa > 2:1324573/1‑150 (MQ=255) cccACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCAc < 1:115080/150‑1 (MQ=255) aCGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGATTTCGGCTGCAGCGCGTCGGGGGTTACAGCGCGTGGTTGGCGGTCCAGGTAGTCGGGCGAGGCCACCAGCAcgcg > 1:1116071/1‑150 (MQ=255) cGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACgcgg < 2:432281/150‑1 (MQ=255) c‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGtt > 2:998066/1‑150 (MQ=255) | ATCAATTCGGGCAGGACGATTTCCAGTTCACCGGCCGCGATGTTGGCGCTGACATCCAGCCACGACTTGTAGACGATACCTTCCCCCTGGATGGCCAGGCGGCGGATGACGTCGGCATCGTCACTGACCAGCGGCCCACGCACC‑TGCACGGTGCGGTTACCCAACTGCCACTTGTCGTACACCCGGCTGTGCTGCATGTACAGCAGACAGGCATGCTGCTGCAGCGCGTCGGGGGTAAGCGGGCGGCCGTGGCGGGCCAGGTAGTCGGGCGAGGCCACCAGCACGCGGCGGTT > NC_002947/2778625‑2778917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |