| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,300,198:1 | +C | 5.5% | intergenic (+53/+29) | pvdQ → / ← lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,300,198 | 1 | . | C | 5.5% | 375.0 / 14.7 | 91 | intergenic (+53/+29) | pvdQ/lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Reads supporting (aligned to +/- strand): ref base . (44/42); new base C (2/3); total (46/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01 | |||||||||||
TTCCGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTG > NC_002947/3300051‑3300347 | ttCCGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑Gc < 1:408702/150‑1 (MQ=255) tCCGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg < 2:86032/150‑1 (MQ=255) tCCGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCg < 2:1991051/150‑1 (MQ=255) gTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGc > 1:504320/1‑150 (MQ=255) gTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGc > 2:487440/1‑150 (MQ=255) ggCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCcgc < 2:518363/150‑1 (MQ=255) gcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGGCAAGGGGGCGGTGGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCAGGATTGCCCGCGAgg > 2:1325539/1‑150 (MQ=255) gcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAgg > 2:1302608/1‑150 (MQ=255) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGc < 1:102373/150‑1 (MQ=255) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGc > 1:1710515/1‑150 (MQ=255) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGACCCATTCGCGGGTAAACCCGCTCTTACCGGGGCCT‑GCGGGCTTGCCCGCGAGGc < 1:1243669/150‑1 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCt < 1:929514/150‑1 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTAAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCt < 1:1578754/150‑1 (MQ=255) tCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg < 1:269103/150‑1 (MQ=255) tCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg < 2:756662/150‑1 (MQ=255) aaGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACA‑GGGCCTCGCGGGCAAGCCCGC‑AGGcccctgta < 2:1993149/150‑6 (MQ=38) ggCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAAt < 1:1042506/150‑1 (MQ=255) gCAGATCCTGAGTCACGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATg > 2:2434608/1‑150 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCa > 2:139997/1‑150 (MQ=255) tCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAgg > 2:1070691/1‑150 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑Gc > 1:1957616/1‑116 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑Gc < 2:1957616/116‑1 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaa > 2:761107/1‑150 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaa > 2:611263/1‑150 (MQ=255) gAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaaa < 2:1703535/150‑1 (MQ=255) ccGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGa < 1:761107/150‑1 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa < 1:2119904/150‑1 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa > 1:794214/1‑150 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa > 1:2315705/1‑150 (MQ=255) aaGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCTAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGgc > 2:1646395/1‑150 (MQ=255) aaGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGgc < 1:1951105/150‑1 (MQ=255) aGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAGCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGgcg < 1:86375/150‑1 (MQ=255) aGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCTCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAACCTCGAACGGGGCCAACTGaaa < 2:611683/150‑1 (MQ=255) gTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGGAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAg > 2:1686082/1‑150 (MQ=255) gCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCt > 1:1498411/1‑150 (MQ=255) gggACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCcgcaggc < 2:124022/104‑5 (MQ=37) gggACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCTCGCGGGCAAGCCcgcaggc > 1:124022/1‑100 (MQ=37) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCgg < 1:1937962/87‑1 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCgg > 2:1937962/1‑87 (MQ=255) aaGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaa < 1:2083007/115‑1 (MQ=255) aaGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTc < 1:611263/150‑1 (MQ=255) aaGGGCGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaa > 2:2083007/1‑115 (MQ=255) gggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGgcgc < 1:185820/127‑1 (MQ=255) gggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGgcgc > 2:185820/1‑127 (MQ=255) gggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCaa > 2:2056070/1‑150 (MQ=255) gTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCaa < 2:794214/150‑1 (MQ=255) tAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAg < 1:2434608/150‑1 (MQ=255) gTCAGCCAGCCCTGAGGCGTCAGGCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGTTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGATAGCCCTGTTCGTCAACCTGCTAGGc > 2:1192398/1‑150 (MQ=255) tCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGcc > 1:1502104/1‑150 (MQ=255) tCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGcc > 1:230884/1‑150 (MQ=255) cagccagcCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGccc < 1:1325539/150‑1 (MQ=255) gccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCGCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCaa > 2:2233209/1‑150 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGTCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAc > 2:1033259/1‑150 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGc < 2:1903713/123‑1 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGc > 1:1903713/1‑123 (MQ=255) ccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAc > 2:1700304/1‑150 (MQ=255) cccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCGGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGGGGCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACcgcg > 1:535398/1‑150 (MQ=255) cccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGTCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACcgcg < 1:1033259/150‑1 (MQ=255) ccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCTCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg > 1:1353855/1‑150 (MQ=255) ccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCACCCTGCAAGGCCCAACCgcgg < 2:950292/150‑1 (MQ=255) cTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcggc > 1:598621/1‑150 (MQ=255) aGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGt < 1:537420/150‑1 (MQ=255) ggCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGCCGGTc > 2:1738532/1‑150 (MQ=255) gCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc < 1:831374/150‑1 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTNCCa < 2:1502104/150‑1 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa < 2:230884/150‑1 (MQ=255) tCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAg < 1:1700304/150‑1 (MQ=255) tCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGCCCCac > 2:946029/1‑149 (MQ=255) cAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGt < 2:1392404/113‑1 (MQ=255) cAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGt > 1:1392404/1‑113 (MQ=255) cAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGt < 2:2315705/150‑1 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg > 1:1905729/1‑136 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcgg < 2:1905729/136‑1 (MQ=255) cTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGcc > 1:1825853/1‑150 (MQ=255) cccATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACTGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGAt > 1:278352/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGc < 1:358334/150‑1 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 2:1825853/150‑1 (MQ=255) cccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAg < 2:1640417/99‑1 (MQ=255) cccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAg > 1:1640417/1‑99 (MQ=255) cccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTgg < 2:1150982/150‑1 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 1:743079/1‑150 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 1:621468/1‑150 (MQ=255) cGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGcc > 1:2155428/1‑150 (MQ=255) gCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCCGCACGATACGCCGTGCCGGCTGGccc > 2:1012868/1‑149 (MQ=255) tCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATc < 2:1639737/150‑1 (MQ=255) cTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa > 2:1938347/1‑150 (MQ=255) attacagggCCTCGCGGGCAAGCCCGC‑AGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGa > 1:1009939/7‑150 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa > 2:401046/1‑111 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa < 1:401046/111‑1 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc > 1:1148933/1‑150 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCtt < 2:2155428/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAGAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg < 1:2176703/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGcc > 1:1433020/1‑126 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGcc < 2:1433020/126‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATc < 1:230136/144‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATc > 2:230136/1‑144 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg < 1:2176690/150‑1 (MQ=255) | TTCCGTTTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTG > NC_002947/3300051‑3300347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |