| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 127109 = | 77 (0.830) | 5 (0.050) | 5/248 | NT | 6.2% | intergenic (‑19/+51) | thrB/PP_0122 | homoserine kinase/hypothetical protein |
| ? | NC_002947 | 127135 = | 76 (0.820) | intergenic (‑45/+25) | thrB/PP_0122 | homoserine kinase/hypothetical protein | |||||
CCTTATTTTCTGGTACGCGCTGATGGCACTGATGCCAATTTCATTCGATCCGACCAGCCGGACATGCTGATTCCGTCCTGGAAGATCTTCGAGTGGTAAGCTGACGCGCACCGTTCACATCAACCCGGCACTTCCCGGCGGAAGTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/127258‑127109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCT > NC_002947/127135‑127260 CCTTATTTTCTGGTACGCGCTGATGGCACTGATGCCAATTTCATTCGATCCGACCAGCCGGACATGCTGATTCCGTCCTGGAAGATCTTCGAGTGGTAAGCTGACGCGCACCGTTCACATCAACCCGGCACTTCCCGGCGGAAGTGCCCG > 2:1887233/1‑150CCTTATTTTCTGGTACGCGCTGATGGCACTGATGCCAATTTCATTCGATCCGACCAGCCGGACATGCTGATTCCGTCCTGGAAGATCTTCGAGTGGTAAGCTGACGCGCACCGTTCACATCAACCCGGCACTTCCCGGCGGAAGTGCCCG > 2:200099/1‑150 CGCGCTGATGGCACTGATGCCAATTTCATTCGATCCGACCAGCCGGACATGCTGATTCCGTCCTGGAAGATCTTCGAGTGGTAAGCTGACGCGCACCGTTCACATCAACCGGGCACTTCCGCCGGGAAGTGCCGGGTTGATGTGATCGGT < 2:633289/150‑1 ACCCGGCACTTCCCGGCGGAAGTGCCCGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTC < 1:2220220/72‑1 ACCCGGCACTTCCCGGCGGAAGTGCCCGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTC > 2:2220220/1‑72 CCGGCACTTCCCGGCGGAAGTGCCGGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGCTCTTCCAGGACGGAATCAGCATGTCCGGCTGGGCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAcgg > 2:568294/1‑147 GGCACTTCCCGGCGGAAGTGCCCGGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCT < 1:633289/150‑1 CCTTATTTTCTGGTACGCGCTGATGGCACTGATGCCAATTTCATTCGATCCGACCAGCCGGACATGCTGATTCCGTCCTGGAAGATCTTCGAGTGGTAAGCTGACGCGCACCGTTCACATCAACCCGGCACTTCCCGGCGGAAGTGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/127258‑127109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gGTTGATGTGAACGGTGCGCGTCAGCTTACCACTCGAAGATCTTCCAGGACGGAATCAGCATGTCCGGCTGGTCGGATCGAATGAAATTGGCATCAGTGCCATCAGCGCGTACCAGAAAATAAGGCT > NC_002947/127135‑127260 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |