| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 160332 | 104 (1.110) | 10 (0.110) | 6/244 | NT | 9.0% | coding (57/1956 nt) | PP_0149 | hypothetical protein |
| ? | NC_002947 | = 160378 | 100 (1.100) | coding (11/1956 nt) | PP_0149 | hypothetical protein | |||||
CTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/160183‑160332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTTGGCCGACCTGCAGCTTGAGCTGCAGGCGTCCGGCCTCGACCCACAACAAACTAAAGCCTCCCAAGCCCTGCTCGACGAGGCCATGGGCAAGCTGCCA < NC_002947/160378‑160230 CTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCG > 1:66911/1‑150CTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCG > 2:2244394/1‑150 CAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGGGCGTGCCTGGCTGCTTGGCTGCGCC > 1:289558/1‑150 TTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGC < 2:1420050/150‑1 CGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCA < 2:2013336/150‑1 CGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGGGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCA < 2:289558/150‑1 CCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGGGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTT < 1:1497433/138‑1 CCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGGGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTT > 2:1497433/1‑138 GGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTTGGCCGAC > 1:815784/1‑127 GGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTTGGCCGAC < 2:815784/127‑1 CTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCC > 1:2254819/1‑109 CTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCC < 2:2254819/109‑1 GCGTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACACCCGCCTTGGCCGACCTGCAGCTTGAGCTGCAGGCGTCCGGCCTCGACCCACAACAAACTAAAGCCTCCCAAGCCCTGCTCGACGAGGCCATGGGCAAGCTGC < 2:998911/150‑1 GTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTTGGCCGACCTGCAGCTTGAGCTGCAGGCGTCCGGCCTCGACCCACAACAAACTAAAGCCTCCCAAGCCCTGCTCGACGAGGCCATGGGCAAGCTGCCA < 1:1796422/150‑1 CTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAGGCCGGACGCCTGCAGCTCAAGCTGCAGGTCGGCCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/160183‑160332‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgTGCGTGCCTGGCTGCTTGGCTGCGCCCTGACGCTGCTCGGCACGCCCGCCTTGGCCGACCTGCAGCTTGAGCTGCAGGCGTCCGGCCTCGACCCACAACAAACTAAAGCCTCCCAAGCCCTGCTCGACGAGGCCATGGGCAAGCTGCCA < NC_002947/160378‑160230 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |