| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 202267 | 109 (1.170) | 6 (0.070) | 4/246 | NT | 5.6% | coding (7773/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 206283 | 95 (1.030) | coding (11789/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/202167‑202267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCGCCTTGCGCAG < NC_002947/206283‑206136 GCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCACTTCGTCGGTGGTGTCGGT < 1:833378/124‑1GCCAGATCAGCCTGGGCATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCACTTCGTCGGTGGTGTCGGT > 2:833378/1‑124 ACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCACTTCGTCGGTG > 1:151392/1‑96 ACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTCACCGACACCACCACTTCGTCGGTG < 2:151392/96‑1 CTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCACTTCGTCGGTGGTG > 1:2019626/1‑70 CTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACCACTTCGTCGGTGGTG < 2:2019626/70‑1 CCACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCGCCTTGCGCAG > 2:1978406/1‑150 CCACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCC < 1:1591257/103‑1 CCACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCC > 2:1591257/1‑103 CACCACTTCGTTGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAG < 1:1528600/57‑1 CACCACTTCGTTGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAG > 2:1528600/1‑57 CACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCGCCTTGC < 1:2173020/145‑1 CACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCGCCTTGC > 2:2173020/1‑145 GCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/202167‑202267‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACCACTTCGTCGGTGGTGTCGGTGACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTGCGACCGTCTACATCCACAGCAGACGTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCGCCTTGCGCAG < NC_002947/206283‑206136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |