New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	298448 =	106 (1.140)	6 (0.070)	6/240	NT	5.9%	coding (94/384 nt)	PP_0244	hypothetical protein
	?	NC_002947	298495 =	90 (1.000)					coding (47/384 nt)	PP_0244	hypothetical protein

CCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/298600‑298448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG  >  NC_002947/298495‑298643                                                                                                                                                                                                                                                                                                                cccGCCAAAAACGCCATAGTGGCTTTGTTCGCCAGCGCCAAGCAACTGAAGAAGCAGTAATGGACGTACCTCGCGAATACGTCGCAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAG                                                                                                                                                          <  2:1098630/147‑1   GGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCC                                                                                                                                                        <  1:1770959/150‑1                     CGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAG                                                                                                                                                          >  1:1347711/1‑130                     CGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCCGCAACACCTGGACAGCGGTGTTGCCGAGGTAG                                                                                                                                                          <  2:1347711/130‑1                                                                                            CTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCTGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACACGGCGGC                                                               >  1:784791/1‑150                                                                                                            GGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCC                                               >  2:561857/1‑150                                                                                                                    CCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC                                       <  1:561857/150‑1                                                                                                                              CTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTG                                                                             >  1:340123/1‑102                                                                                                                              CTGGACAGCGGTGTTGCCGAGGTAGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTG                                                                             <  2:340123/102‑1                                                                                                                                               CGAGGTAGCCCTGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGTGCTGACGCGGTGC            <  2:784791/150‑1                                                                                                                                                     AGCCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACGGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTG      >  1:1497901/1‑150                                                                                                                                                       CCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCT    <  1:99259/150‑1                                                                                                                                                       CCCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCT    >  1:998530/1‑150                                                                                                                                                        CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTG   >  2:942793/1‑150                                                                                                                                                        CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC                                       <  2:2235298/114‑1                                                                                                                                                        CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGC                                       >  1:2235298/1‑114                                                                                                                                                        CCAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGGTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTG   >  2:1947008/1‑150                                                                                                                                                         CAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGTCGTCGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG  >  1:1353692/1‑150                                                                                                                                                                                                                                                                                                                CCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAACTGAAGAAGAAGTAATGGACGTACCTCGCGAATACGTCGAAAGCGCCTTCAGCCAGCTGCTGGGCTGCCGCCTGCAACACCTGGACAGCGGTGTTGCCGAGGTAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/298600‑298448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccAGCAGCTGGCTGAAGGCGCTTTCGACGTATTCGCGAGGTACGTCCATTACTTCTTCTTCAGTTGCTTGGCGTTGGCGAACAGGGCGGCCATGGCGTTGTTGGCCGGGGCTGCGGTGGCGGTTTCGCGCTGACGCGGTGCCTGCTGCTGG  >  NC_002947/298495‑298643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.