| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 363530 = | 76 (0.810) | 6 (0.070) | 6/216 | NT | 8.8% | intergenic (‑45/+122) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme |
| ? | NC_002947 | 363623 = | 58 (0.720) | intergenic (‑138/+29) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme | |||||
CGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363692‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA > NC_002947/363623‑363764 CGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCC > 1:1381705/1‑150 CAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCNGCT < 2:1510142/150‑1 CCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAG > 2:1001020/1‑150 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 2:1857312/150‑1 CGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 1:1462269/150‑1 GGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT > 2:412485/1‑150 AAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG > 1:1077927/1‑132 AAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGG < 2:1077927/132‑1 AACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTC > 1:1097110/1‑106 AACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTC < 2:1097110/106‑1 GTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCT > 1:1799882/1‑150 TGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCC > 1:284746/1‑132 TGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCC < 2:284746/132‑1 CCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGC > 2:1387476/1‑150 GGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGA < 1:1387476/150‑1 CGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTACATTTATTCCCTTCCTTCTGCTGGTTTGAGCACGCGGCCACCCATTCGGGTGATGATCTCGCTGGCGCGT > 1:42828/1‑150 GCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTT < 1:1555088/144‑1 GCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTT > 2:1555088/1‑144 CCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTG > 1:1983588/1‑150 CGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCAgcaa > 1:2151922/1‑146 CGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGC > 2:307950/1‑150 CGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGG > 2:505961/1‑85 CGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGG < 1:505961/85‑1 GCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCT < 2:1782664/150‑1 GCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCAT < 2:1336351/146‑1 GCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCAT > 1:1336351/1‑146 TCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGG > 1:1501809/1‑150 TCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGG > 2:1100790/1‑150 TCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGG > 1:410337/1‑150 CCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCC > 2:1382742/1‑150 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA < 2:1983588/150‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA > 2:350764/1‑150 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA < 1:307950/150‑1 CGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363692‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA > NC_002947/363623‑363764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |