| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 414024 | 43 (0.460) | 6 (0.080) | 6/194 | NT | 14.1% | intergenic (+41/‑162) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_002947 | = 414054 | 40 (0.550) | intergenic (+71/‑132) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II | |||||
GTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/413852‑414024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggcaagcccgctcccacaggGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCA < NC_002947/414054‑413910 GTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACAGTATTGGCTTATTC < 2:1675837/150‑1 TGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCG > 1:642761/1‑150 ACAAAGCGTTCCGCTCTGGCTCTCACCGGCAGGCTCTGCAGAAGGAGGCCGGGGTGATCGATGCCGC‑CAGTACTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGG < 1:1332982/150‑1 ACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGAGGAGAATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGG < 2:929368/150‑1 CAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGG > 1:948008/1‑150 CAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGG > 1:2258878/1‑150 AAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGC > 1:1245989/1‑150 AAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTA > 2:892634/1‑141 AAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTA < 1:892634/141‑1 AGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAA < 1:454399/150‑1 TCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCG < 1:2297296/150‑1 CGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAATTTCGCGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCA < 1:2253580/150‑1 CGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCA < 1:463989/150‑1 CCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAG < 2:2296423/150‑1 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAGGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG > 1:1097321/1‑150 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCTTGCCCGCgaataag < 2:590094/148‑8 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCTTGCCCGCgaataag > 1:590094/1‑141 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG > 2:1100327/1‑150 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGC < 2:1930738/137‑1 CTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGC > 1:1930738/1‑137 CACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATT > 1:870527/1‑150 CCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTC > 1:59148/1‑150 GGCCGGGGTGATCGATGCGGCACAGT‑TTGCAGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTCCGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCA < 2:1727418/150‑1 GGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTAC < 2:59148/150‑1 CGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGA < 2:870527/150‑1 GATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGC < 2:951697/97‑1 GATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGC > 1:951697/1‑97 CGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCTTGCCCGCga < 2:1641809/86‑3 CGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCTTGCCCGCga > 1:1641809/1‑84 GATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCC > 2:1066356/1‑81 GATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCC < 1:1066356/81‑1 CGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTG > 1:425110/1‑122 CGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTG < 2:425110/122‑1 GCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTG > 1:2421125/1‑150 GCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTT < 1:695368/66‑1 GCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTT > 2:695368/1‑66 CAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGT > 2:1245989/1‑150 CCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCAC > 1:464499/1‑121 CCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCAC < 2:464499/121‑1 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTTGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGC > 1:1624932/1‑150 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGG < 2:2197853/137‑1 CCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGG > 1:2197853/1‑137 CGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCA > 2:2258878/1‑150 CGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGC < 1:173545/146‑1 CGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGC > 2:173545/1‑146 GCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCAT > 2:562817/1‑150 GCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCAT > 1:2068360/1‑132 GCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCAT < 2:2068360/132‑1 GCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCC < 2:248044/104‑1 GCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCC > 1:248044/1‑104 CTCCCACAGAGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGC < 1:1476864/144‑1 CTCCCACAGAGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGC > 2:1476864/1‑144 CCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACG < 2:1678178/120‑1 CCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACG > 1:1678178/1‑120 CACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATC > 1:1534703/1‑150 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCA > 2:1111550/1‑150 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCA > 1:454571/1‑150 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTAT > 2:1384330/1‑77 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTAT < 1:1384330/77‑1 GGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGC > 2:1613487/1‑116 GGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGCCGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGC < 1:1613487/116‑1 GTGTACAAAGCGTTCCGCTCGGCCTCCCACCGCCAGGCCCTGCAGAAGGAGGCCGGGGTGATCGATGCGGCACAGT‑TTGCCGATGAACGCCGTGAAGTGCGGCGGATCTGGGGTGAGTTGGGTTTAAGCTGATACCGTGTTGGCTTATTCGCGGGCAAGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/413852‑414024‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tattcgcgggcaagcccgctcccacaggGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAAGCCAACACGGTATCAGCTTAAACCCAACTCACCCCAGATCCGCCGCACTTCACGGCGTTCATCGGCAAACTGTGCCGCATCGATCA < NC_002947/414054‑413910 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |