| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 529666 | NA (NA) | 13 (0.140) | 11/242 | NT | NA | noncoding (2901/2902 nt) | PP_23SC | 23S ribosomal RNA |
| ? | NC_002947 | = 529693 | NA (NA) | intergenic (+26/‑94) | PP_23SC/PP_5SC | 23S ribosomal RNA/5S ribosomal RNA | |||||
GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/529515‑529666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCC < NC_002947/529693‑529545 GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA < 2:936067/150‑1GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA < 2:1546550/150‑1GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA < 2:627889/150‑1GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA < 1:1919485/150‑1GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA > 2:2406150/1‑150GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTCCCCGTGAGGCTTGACCATATAACA > 2:1833716/1‑150GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGAGTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA > 1:1980669/1‑150 GGAAACTTGCCTCAAGCTGCGATCTCACTGGGATCTTGAAGCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 2:1454758/150‑1 GGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 1:1613470/150‑1 GGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC > 2:1853682/1‑150 GGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 1:673559/150‑1 GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC > 2:577236/1‑150 GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC < 2:729912/150‑1 GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC < 2:1644376/150‑1 GAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTAAGTCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC > 1:1730404/1‑150 AAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC > 2:2347226/1‑149 AAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC < 1:2347226/149‑1 AGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA > 1:1786929/1‑135 AGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACA < 2:1786929/135‑1 TCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAA‑CAATCTGCGTAGCAGAT < 2:2113577/150‑1 TCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCA‑CAATCTGCGTAGCAGAT > 2:1120900/1‑150 ACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAA‑CAATCTGCGTAGCAGATTGCT > 1:351391/1‑150 ACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 2:1102325/124‑1 ACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC > 1:1102325/1‑124 CTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTTCCCTTGAGGCTTGACCATATAACACCCAAA‑CAATCTGCGTAGCAGATTGCTT < 1:887856/150‑1 CTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCA‑CAATCTGCGTAGCAGATTGCTT < 1:1120900/150‑1 GGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC‑CAAGCAATCTGCGTAGCAGATTGCTTGG < 1:1345486/150‑1 CTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTT < 2:1124765/150‑1 TGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTAT < 2:351391/150‑1 ATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCG‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATG < 2:1417049/150‑1 CTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATAT > 2:1926078/1‑144 CTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATAT < 1:1926078/144‑1 GTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAAC > 2:67856/1‑94 GTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAAC < 1:67856/94‑1 TACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC > 1:21897/1‑87 TACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 2:21897/87‑1 GTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC < 1:2405300/66‑1 GTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACAC > 2:2405300/1‑66 CAATACTAATTGCCCGTGAGGCTTGACCATATAACACCCAAG‑CAATCTGCGTAGCAGATTGCTTGGGT < 2:1801821/68‑1 CAATACTAATTGCCCGTGAGGCTTGACCATATAACACC‑CAAGCAATCTGCGTAGCAGATTGCTTGGGT > 1:1801821/1‑68 CACCACCA‑CAATCTGCGTAGCAGCTTGCTTGGGTGCAATATGGTCAAGCCCCACGGGCAATTAGTATTTAGTAGCTCCAACCGTCGTAGCGCATACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGAT > 1:168859/1‑150 CACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGAT > 2:1765577/1‑150 ACCACCA‑CACTCTGCGGAGCAGAGTGCTTGGGTGATATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATC > 2:525156/1‑150 ACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATC < 2:219770/150‑1 ACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATC > 1:857484/1‑150 ACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAA < 1:139393/59‑1 ACCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAA > 2:139393/1‑59 CCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCC < 2:2160837/150‑1 CCACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCC < 1:1382624/150‑1 CACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCC > 1:887177/1‑150 CACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGG > 1:877127/1‑53 CACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGG < 2:877127/53‑1 GGGAAACTTGCCTCAAGATGAGATCTCACTGGGATCTTGAATCCCCTAAAGGGCCGTCGAAGACTACGACGTTGATAGGTTGGGTGTGTAAGCGCTGTGAGGCGTTGAGCTAACCAATACTAATTGCCCGTGAGGCTTGACCATATAACACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/529515‑529666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccACCA‑CAATCTGCGTAGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCC < NC_002947/529693‑529545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |