New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1025270 =	72 (0.770)	6 (0.080)	4/196	NT	12.8%	intergenic (‑121/+108)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein
	?	NC_002947	1025363 =	25 (0.340)					intergenic (‑214/+15)	opdP/dppA‑II	glycine‑glutamate dipeptide porin/dipeptide ABC transporter substrate‑binding protein

CAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1025444‑1025270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCG  >  NC_002947/1025363‑1025509                                                                                                                                                                                                                                                                                                                                    CAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGG                                                                                                                                                                              <  2:1035996/150‑1     GTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGC                                                                                                                                                                          <  1:992692/150‑1     GTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGAAAGGTGGCGACACTGCGCCCTACCTGAGGGAGC                                                                                                                                                                          <  1:2276514/150‑1       TTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGG                                                                                                                                                                        <  2:1574476/150‑1           CAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTT                                                                                                                                                                    >  2:962888/1‑150           CAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTT                                                                                                                                                                    >  2:962860/1‑150               TCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCC                                                                                                                                                                <  1:1371482/150‑1                CAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCG                                                                                                                                                               <  1:130663/150‑1                   GGTCAGCCCGTTTGGGCGCAATGATTTTCCGGACTTGAAGGTTTATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGA                                                                                                                                                            <  2:1145564/150‑1                          CCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAG                                                                                                                                                        >  2:1975002/1‑147                          CCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAG                                                                                                                                                        <  1:1975002/147‑1                              TTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTT                                                                                                                                                                    <  2:2101594/131‑1                              TTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTT                                                                                                                                                                    >  1:2101594/1‑131                                  GCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGG                                                                                                                                                                              >  2:2369185/1‑117                                  GCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGG                                                                                                                                                                              <  1:2369185/117‑1                                        TGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGG                                                                                                                                                                        >  2:2443410/1‑117                                        TGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGG                                                                                                                                                                        <  1:2443410/117‑1                                                         GTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCAGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGC                                                                                                                                                                      >  1:1530642/1‑102                                                         GTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCAGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGC                                                                                                                                                                      <  2:1530642/102‑1                                                                                  CGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGC                                                                                                                                                                  <  2:189517/81‑1                                                                                  CGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGC                                                                                                                                                                  >  1:189517/1‑81                                                                                                    GCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAAT                                                                                                                                 >  1:1569925/1‑96                                                                                                    GCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAAT                                                                                                                                 <  2:1569925/96‑1                                                                                                      CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTG                                                                             <  1:594015/146‑1                                                                                                      CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTG                                                                             >  2:594015/1‑146                                                                                                      CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGATTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACAATCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAA                                                                         >  2:1254261/1‑150                                                                                                      CCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGACCTACCTGAGGGAGCGGGCTTGCCCGCGAAGATGCCGGTACTGGCTAAGGCATAATCAACACTCACACCGGAAAAATAGTTGCGCCCAAACGGGCAGACATTGAACTGGCAA                                                                         >  2:1125731/1‑150                                                                                                                                                      GGAGCGGGCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCGACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTA                         >  1:2239169/1‑150                                                                                                                                                             GCTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTA                  >  1:776442/1‑150                                                                                                                                                              gTTGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTACGCAACACGCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTAC                 <  1:639081/149‑1                                                                                                                                                                TGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGG                                                    <  2:942127/113‑1                                                                                                                                                                TGCCCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGG                                                    >  1:942127/1‑113                                                                                                                                                                   CCGCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCT            >  1:2208293/1‑150                                                                                                                                                                     GCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGC          <  2:1100520/150‑1                                                                                                                                                                     GCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGC          >  2:2174075/1‑150                                                                                                                                                                     GCGAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGC          >  2:1280068/1‑150                                                                                                                                                                       GAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTT        <  2:2204670/150‑1                                                                                                                                                                       GAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTT        >  2:954445/1‑150                                                                                                                                                                       GAAGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTT        <  1:1254261/150‑1                                                                                                                                                                         AGAGGCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGA      <  1:1035996/150‑1                                                                                                                                                                             GCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGTTGCTTGAGCCG  >  1:2121134/1‑150                                                                                                                                                                             GCCGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCG  >  2:2167353/1‑150                                                                                                                                                                                                                                                                                                                                    CAAGGTTTCCCAGTTCAAGGTCAGCCCGTTTGGGCGCAATGATTTTTCCGGTGTGAGTGTTGATTAAGCGTTAGCCAGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGATCTCGACAGGTTCGGACACTGCGCCCTACCTGAGGGAGCGGGCTTGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1025444‑1025270 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggagcgggcttgcccgcgaagaggccGGTACTGGCTAACGCTTAATCAACACTCACACCGGAAAAATCATTGCGCCCAAACGGGCTGACCTTGAACTGGGAAACCTTGACGCTAAGCGGCTGGCTCACGATGGAATGCGCCACCGGCGTAATCGGTACCTGCTGCTTGAGCCG  >  NC_002947/1025363‑1025509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.