| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1102423 = | 106 (1.140) | 5 (0.060) | 5/236 | NT | 5.0% | coding (504/648 nt) | ttg2D | toluene tolerance protein |
| ? | NC_002947 | 1102458 = | 89 (1.010) | coding (539/648 nt) | ttg2D | toluene tolerance protein | |||||
AGCGGCCTCACTCATTTGACGCTCTTCTCTGGCGAGTTGTCGGCAGCCTGCTTGGCCTTGGCCACTTCGCCGGCCCAGCCGTCGATGGTCTTGTCCAGGTCATTGCCGTTGCGCTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1102578‑1102423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatg‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAGGCCGCTGTAAGCATGGCAGAGCCAGGCGTGCTGC > NC_002947/1102458‑1102606 AGCGGCCTCACTCATTTGACGCTCTTCTCTGGCGAGTTGTCGGCAGCCTGCTTGGCCTTGGCCACTTCGCCGGCCCAGCCGTCGATGGTCTTGTCCAGGTCATTGCCGTTGCGCTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTG > 2:974483/1‑150 GCCTCACTCATTTGACGCTCTTCTCTGGCGAGTTGTCGGCAGCCTGCTTGGCCTTGGCCACTTCGCCGGCCCAGCCGTCGATGGTCTTGTCCAGGTCATTGCCGTTGCGCTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGA < 1:1912597/150‑1 CCTCACTCATTTTACGCTCTTCTCTGGCGAGTTGTCGGCAGCCTGCTTGGCCTTGGCCACTTCGCCGGCCCAGCCGTCGATGGTCTTGTCCAGGTCATTGCCGTTGCGCTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGAT < 1:388800/150‑1 CTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGATGTTGATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAA > 1:116861/1‑150 TGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGT > 2:2161528/1‑150 CATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAG > 2:120368/1‑150 ATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCC < 1:852083/125‑1 ATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCC > 2:852083/1‑125 CGATG‑CCATGCAGCGCAACGGCAATGACCTGCAGAAGACAATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAGGCCGCTGTAAGCATGGCAGAGCCAGGCGTG < 2:1774557/150‑1 GATG‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAGGCCGCTGTAAGCATGGCAGAGCCAGGCGTGC < 1:229724/150‑1 G‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAGGCCGCTGTAAGCATGGCAGAGCCAGGCGTGCTGC < 2:1158874/150‑1 AGCGGCCTCACTCATTTGACGCTCTTCTCTGGCGAGTTGTCGGCAGCCTGCTTGGCCTTGGCCACTTCGCCGGCCCAGCCGTCGATGGTCTTGTCCAGGTCATTGCCGTTGCGCTGCATGGCATCGGCGAACTGGTCACGGAACAGCTTGCCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1102578‑1102423‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgatg‑CCATGCAGCGCAACGGCAATGACCTGGACAAGACCATCGACGGCTGGGCCGGCGAAGTGGCCAAGGCCAAGCAGGCTGCCGACAACTCGCCAGAGAAGAGCGTCAAATGAGTGAGGCCGCTGTAAGCATGGCAGAGCCAGGCGTGCTGC > NC_002947/1102458‑1102606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |