New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1149525 =	90 (0.960)	11 (0.120)	10/236	NT	11.2%	coding (235/513 nt)	PP_1008	RNA polymerase subunit sigma‑24
	?	NC_002947	1149552 =	89 (1.010)					coding (208/513 nt)	PP_1008	RNA polymerase subunit sigma‑24

CCCAGCACGGCCGAAGACCTGCTGCAGGAAACCTACCTGCGGGTGTCCCGCGCGCTGGGCGAGCGGCCCATCGAGCACATCGAGCCGTTCGTGTTTCAGACCGCGCGCAACCTGGCGCTGGACCACCTGCGTGCACGCCGGGTGCAGGCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1149678‑1149525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgcaGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTGGGGTTACCGACCATGCGCTGCA  >  NC_002947/1149552‑1149698                                                                                                                                                                                                                                                                                                               CCCAGCACGGCCGAAGACCTGCTGCAGGAAACCTACCTGCGGGTGTCCCGCGCGCTGGGCGAGCGGCCCATCGAGCACATCGAGCCGTTCGTGTTTCAGACCGCGCGCAACCTGGCGCTGGACCACCTGCGTGCACGCCGGGTGCAGGCA                                                                                                                                                         >  1:2057016/1‑150                                                CCGCGCGCTGGGCGAGCGGCCCATCGAGCACATCGAGCCGTTCGTGTTTCAGACCGCGCGCAACCTGGCGCTGGACCACCTGCGTGCACGCCGGGTGCAGGC                                                                                                                                                          <  1:1208388/102‑1                                                CCGCGCGCTGGGCGAGCGGCCCATCGAGCACATCGAGCCGTTCGTGTTTCAGACCGCGCGCAACCTGGCGCTGGACCACCTGCGTGCACGCCGGGTGCAGGC                                                                                                                                                          >  2:1208388/1‑102                                                                                                                     GCTGGACCACCTGCGTGCACGCCGGGTGCAG‑‑‑‑GCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATG                                                                                          <  1:716818/93‑1                                                                                                                     GCTGGACCACCTGCGTGCACGCCGGGTGCAG‑‑‑‑GCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATG                                                                                          >  2:716818/1‑93                                                                                                                            CACCTGCGTGCACGCCGGGTGCAGGCACGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCC                              >  2:975954/1‑150                                                                                                                            CACCTGCGTGCACGCCGGGTGCAGGCACGAATGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCC                              >  1:2096730/1‑150                                                                                                                              CCTGCGTGCACGCCGGGTGCAG‑‑‑‑GCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTG                        >  2:1568276/1‑150                                                                                                                                TGCGTGCACGCCGGGTGCAGGCACGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACAC                                                                                                                >  1:2174835/1‑64                                                                                                                                TGCGTGCACGCCGGGTGCAGGCACGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACAC                                                                                                                <  2:2174835/64‑1                                                                                                                                 GCGTGCACGCCGGGTGCAGGCACGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACG                                                                                                           <  1:1664831/68‑1                                                                                                                                 GCGTGCACGCCGGGTGCAGGCACGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACG                                                                                                           >  2:1664831/1‑68                                                                                                                                       ACGCCGGGTGCAGGCACGCAGGTGGTGCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACACGCAGGACGGTTGCCGACAGCCGGGCGTCGGCCGGGCTGGGGTT                   >  2:1204315/1‑150                                                                                                                                            GGGTGCAGGCACGAATGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTGGGGTTACCGA              <  2:2096730/150‑1                                                                                                                                                       CGCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTGGGGTTACCGACCATGCGCTGC   <  1:2171622/150‑1                                                                                                                                                        GCAGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTGGGGTTACCGACCATGCGCTGCA  <  2:2224620/150‑1                                                                                                                                                                                                                                                                                                               CCCAGCACGGCCGAAGACCTGCTGCAGGAAACCTACCTGCGGGTGTCCCGCGCGCTGGGCGAGCGGCCCATCGAGCACATCGAGCCGTTCGTGTTTCAGACCGCGCGCAACCTGGCGCTGGACCACCTGCGTGCACGCCGGGTGCAGGCACGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1149678‑1149525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgcaGGTGGTCCAGCGCCAGGTTGCGCGCGGTCTGAAACACGAACGGCTCGATGTGCTCGATGGGCCGCTCGCCCAGCGCGCGGGACACCCGCAGGTAGGTTTCCTGCAGCAGGTCTTCGGCCGTGCTGGGGTTACCGACCATGCGCTGCA  >  NC_002947/1149552‑1149698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.