| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1159167 = | 128 (1.370) | 6 (0.070) | 6/230 | NT | 5.5% | intergenic (+7/‑127) | gtsA/gtsB | mannose/glucose ABC transporter substrate‑binding protein/ABC transporter permease |
| ? | NC_002947 | 1159256 = | 87 (1.010) | intergenic (+96/‑38) | gtsA/gtsB | mannose/glucose ABC transporter substrate‑binding protein/ABC transporter permease | |||||
AGGCCCGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1159324‑1159167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGGGCTTCTAC > NC_002947/1159256‑1159404 AGGCCCGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTG > 1:1953105/1‑150 GCCCGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCGCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGAGCAAACCAGCTCCCACAGGTCCGGCCTCATCACGAAAAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCC > 2:942012/1‑150 GCCCGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCC > 2:1807043/1‑150 CGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGC > 1:1529283/1‑150 AGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAA < 1:699530/150‑1 TTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCACGCCCGCtccca < 1:994541/150‑6 GCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCC > 2:1287728/1‑150 ACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCCCACCCCT > 1:963639/1‑144 ACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCCCACCCCT < 2:963639/144‑1 AACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGC < 1:1287728/150‑1 GGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGA > 1:843615/1‑69 GGGAGCGGGCGTGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGA < 2:843615/69‑1 TGCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTG < 2:900865/150‑1 GCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGG < 1:403381/150‑1 GCCCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGG > 1:2348554/1‑150 CCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGGGC > 2:2360635/1‑150 CCGCGAAGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATAAATAAATAAAACGATTGTCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGGGC > 2:1797389/1‑150 AGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGGGCTTCTAC < 2:9955/150‑1 AGGCCCGCAGTTGGGCGGTGGTCGTTGTCATGTATTGGATCCCGAGGTAGTGGCGGTGCTACGCACCGCTTCGCGGGCAAGCCCGCTCCCACAGGTCCGGCGTCATGACCAGGAACAGTGGTGAGCAGGGCCCATCTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1159324‑1159167‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccgcgaaGCGGTGCGTAGCACCGCCACTACCTCGGGATCCAATACATGACAACGACCACCGCCCAACTGCGGGCCTCACCCCTGGACGCGCTTCAGCGCTGGCTGCCCAAGCTGGTGCTGGCACCCAGCATGTTCATCGTCCTGGTGGGCTTCTAC > NC_002947/1159256‑1159404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |