| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1207565 | 97 (1.040) | 5 (0.060) | 5/238 | NT | 5.0% | coding (1442/3150 nt) | PP_1058 | hypothetical protein |
| ? | NC_002947 | = 1207574 | 97 (1.090) | coding (1433/3150 nt) | PP_1058 | hypothetical protein | |||||
TCGGCGATAATTTCAAGGTAGGTGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1207412‑1207565‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgaGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCTACCTT < NC_002947/1207574‑1207426 TCGGCGATAATTTCAAGGTAGGTGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAG < 1:1010743/150‑1TCGGCGATAATTTCAAGGTAGGTGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAG < 1:1425121/150‑1 TAGGTGGTGAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGGTGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGCCCCGCGAGCCATCGGCGGTGCGTGCGAACAAGGTGAGCTACAGCTTCACC < 2:930240/150‑1 TGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAG > 1:938645/1‑128 TGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAG < 2:938645/128‑1 CTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGAGCTACAGCTTCACCTT > 1:1925195/1‑71 CTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGAGCTACAGCTTCACCTT < 2:1925195/71‑1 CCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGAGCTACAGCTTCACCTTGTT < 1:2235253/60‑1 CCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGAGCTACAGCTTCACCTTGTT > 2:2235253/1‑60 AGGTGAGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCT > 1:1656285/1‑150 GGTGCGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCTA > 2:398051/1‑150 GGTGAGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCTA > 1:696765/1‑150 AGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCTACCTT < 2:1657995/150‑1 TCGGCGATAATTTCAAGGTAGGTGGTCAGTACCCGCAGCTTGGCGGTTGAGCCCAGCTCCAGCTTGCTGCCTTCGTTGATGTCGAAGGGCTGGTTGGTGCTGTCGGTCTGCACCCGGACCCGCGAGCCATCGGCGGTGCGTTCGAACAAGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1207412‑1207565‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggtgaGCTACAGCTTCACCTTGTTCGAACGCACCGCCGATGGCTCGCGGGTCCGGGTGCAGACCGACAGCACCAACCAGCCCTTCGACATCAACGAAGGCAGCAAGCTGGAGCTGGGCTCAACCGCCAAGCTGCGGGTACTGACCACCTACCTT < NC_002947/1207574‑1207426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |