New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1225139 =	82 (0.880)	5 (0.060)	4/240	NT	6.1%	coding (292/747 nt)	gltJ	glutamate/aspartate ABC transporter permease
	?	NC_002947	1225162 =	74 (0.830)					coding (269/747 nt)	gltJ	glutamate/aspartate ABC transporter permease

GGTCGCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1225291‑1225139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGAT  >  NC_002947/1225162‑1225310                                                                                                                                                                                                                                                                                                                GGTCGCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGC                                                                                                                                                          <  1:108355/150‑1  GTCGCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGCA                                                                                                                                                         <  2:1813483/150‑1     GCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGC                                                                                                                                                          <  1:1142038/146‑1     GCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGC                                                                                                                                                          >  2:1142038/1‑146                                                                                                                     TTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGGCCGGTACGGTACGCAT                                      >  2:2274467/1‑150                                                                                                                                GGACCTGCTGCCAGAAGGCTTGCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGA                           >  2:2449405/1‑150                                                                                                                                GGACCTGCTGCCAGAAGGCTTGCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCG                                                                                                  <  1:982965/79‑1                                                                                                                                GGACCTGCTGCCAGAAGGCTTGCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCG                                                                                                  >  2:982965/1‑79                                                                                                                                     TGCTGCCAGAAGGCTTGCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGAC                      <  1:2449405/150‑1                                                                                                                                                     GCAGGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGA      <  1:998656/150‑1                                                                                                                                                        GGTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACTTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGA   >  1:551091/1‑150                                                                                                                                                         GTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGAT  >  1:1384825/1‑150                                                                                                                                                         GTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGAT  >  1:51020/1‑150                                                                                                                                                         GTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGAT  >  2:1016914/1‑150                                                                                                                                                                                                                                                                                                                GGTCGCTCCTCGGTGTCATGCGTACCGTACCGAACCGCCTGGTATCGGGTATCGCCACCGCCTACGTGGAACTGTTCCGCAACGTGCCACTGCTGGTGCAACTGTTCATCTGGTACTTCCTGGTACCGGACCTGCTGCCAGAAGGCTTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1225291‑1225139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTCCGGTACCAGGAAGTACCAGATGAACAGTTGCACCAGCAGTGGCACGTTGCGGAACAGTTCCACGTAGGCGGTGGCGATACCCGATACCAGGCGGTTCGGTACGGTACGCATGACACCGAGGAGCGACCCCAGCAGCAGCGCGATGAT  >  NC_002947/1225162‑1225310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.