New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1246689 | 87 (0.930) | 4 (0.050) | 4/210 | NT | 5.2% | intergenic (+84/‑287) | PP_1087/argG | OmpA family outer membrane protein/argininosuccinate synthase |
? | NC_002947 | = 1246715 | 72 (0.920) | intergenic (+110/‑261) | PP_1087/argG | OmpA family outer membrane protein/argininosuccinate synthase |
GAAACCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1246524‑1246689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgtgagatcgagcgcCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCAGGT < NC_002947/1246715‑1246569 GAAACCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGC > 1:1942503/1‑150 AACCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCT > 1:1783427/1‑150 CCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGT < 1:1254467/150‑1 CCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGT < 1:1839535/150‑1 CCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGT < 1:1839536/150‑1 CGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTG > 2:542079/1‑150 TGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCCGCGCCTGTGAcg > 2:1955745/1‑148 AAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCG > 2:2272272/1‑150 AAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAG > 1:1419888/1‑150 GCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCG > 2:332866/1‑150 GCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCG > 2:1259398/1‑150 GCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCAGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCG > 2:332806/1‑150 CCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGC > 1:2435358/1‑150 GGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATC > 1:744246/1‑130 GGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATC < 2:744246/130‑1 GGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGC > 2:1801948/1‑111 GGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGC < 1:1801948/111‑1 GCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTG < 1:1955745/150‑1 GCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTTGCATCAAGGCCGCACAGTTTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAA < 1:1208000/150‑1 ATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTT < 2:1439877/111‑1 ATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTT > 1:1439877/1‑111 TGTGAGATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACG > 1:1259398/1‑150 ATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAG > 2:680849/1‑150 ATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAG > 1:1651023/1‑150 ATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGG < 1:2032543/124‑1 ATCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGG > 2:2032543/1‑124 TCGAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGG < 2:1193225/150‑1 GAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCA > 1:2414166/1‑150 GAGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCA > 1:2241659/1‑150 AGCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCAG > 1:1196830/1‑150 GCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCG > 2:442488/1‑134 GCGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCG < 1:442488/134‑1 CGCCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCAGGT < 2:2448759/150‑1 CCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGAC < 1:941113/105‑1 CCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGAC > 2:941113/1‑105 CCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACC < 2:1585787/102‑1 CCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACC > 1:1585787/1‑102 GAAACCGGTGGAAAAGCCGGTTGAGCAAGCGGCGCCGGGTGTTGCACCTGCCTCGGGCGTCCCGGGGGCGAAGGCGCCCTGAGATCTGGTCGGTGCATGTCATGGGCTCGCATCAAGGCCGCCAGGGGTTCGTCACAACATTTTCAGCGCCTGTGAGATCGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1246524‑1246689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgtgagatcgagcgcCTCAGGTGTCCGCCTCGAAACATTCTGCGCTCGATCTCACAGGCGCTGAAAATGTTGTGACGAACCCCTGGCGGCCTTGATGCGAGCCCATGACATGCACCGACCAGATCTCAGGGCGCCTTCGCCCCCGGGACGCCCGAGGCAGGT < NC_002947/1246715‑1246569 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |