New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 126455884 (0.900)6 (0.070) 6/238 NT 6.7% coding (868/1017 nt) PP_1106 hypothetical protein
?NC_002947 = 1264577 88 (0.990)coding (849/1017 nt) PP_1106 hypothetical protein

CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1264406‑1264558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC  <  NC_002947/1264577‑1264430
                                                                                                                                                                                                                                                                                                             
CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTG                                                                                                                                                         >  1:1711182/1‑150
 TTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGG                                                                                                                                                        >  1:2296288/1‑150
 TTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGG                                                                                                                                                        >  2:1153139/1‑150
  TTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGCCCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC                                                                                                                                                       <  2:2234357/150‑1
                       TGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTG                                                                                                                                  <  1:1153139/150‑1
                           CACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCA                                                                                                                              <  2:2296288/150‑1
                                                 TCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTG                                                                                                                      >  2:852148/1‑136
                                                 TCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTG                                                                                                                      <  1:852148/136‑1
                                                                             CTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC                                                                                                                                                       <  1:619484/75‑1
                                                                             CTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGC                                                                                                                                                       >  2:619484/1‑75
                                                                                                        CCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCC                                                                                                                               <  1:538991/72‑1
                                                                                                        CCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCCTGGCCTGCTCTGGGCCATTGGCC                                                                                                                               >  2:538991/1‑72
                                                                                                                                                    TGGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTG     >  1:212334/1‑150
                                                                                                                                                     GGCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGC    <  2:1895239/150‑1
                                                                                                                                                      GCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTC                                   <  1:830260/118‑1
                                                                                                                                                      GCCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTC                                   >  2:830260/1‑118
                                                                                                                                                       CCTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC  >  1:847352/1‑150
                                                                                                                                                                                                                                                                                                             
CTTTCATGGCGAGGGGGCGGTGTTGGGCACATCGTCTTCGTCGCCATACTCGGTGACGAAGGCGCGGGCATCCAGGCCTTGTTCGGTGAGGTAGCGCACCAGTACCTCGACCGAGCCGTGAGTGACCATCACCCGTTGGGCACCGGTCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1264406‑1264558
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccTGGCCTGCTCTGGGCCATTGGCCAGACCGGTGCCCAACGGGTGATGGTCACTCACGGCTCGGTCGAGGTACTGGTGCGCTACCTCACCGAACAAGGCCTGGATGCCCGCGCCTTCGTCACCGAGTATGGCGACGAAGACGATGTGCCC  <  NC_002947/1264577‑1264430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.