| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1296790 = | NA (NA) | 5 (0.060) | 3/236 | NT | NA | intergenic (‑537/‑29) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA/transposase |
| ? | NC_002947 | 1296828 = | NA (NA) | coding (10/1329 nt) | PP_1133 | transposase | |||||
TGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1296945‑1296790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG > NC_002947/1296828‑1296975 TGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGG > 1:2431494/1‑150 GAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGAAGTCCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGG < 1:24495/150‑1 AACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC > 1:1604744/1‑150 AACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC < 2:1543494/150‑1 ACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC < 1:183631/150‑1 ACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC > 1:1840046/1‑150 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGC > 2:2215474/1‑131 TGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGC < 1:2215474/131‑1 ATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC < 1:1320013/88‑1 ATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC > 2:1320013/1‑88 GGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC > 2:980505/1‑69 GGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGC < 1:980505/69‑1 TTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCA > 2:237415/1‑150 TTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCA > 2:1866910/1‑150 TTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGG > 2:242866/1‑99 TTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGG < 1:242866/99‑1 CGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTC > 2:589501/1‑150 GGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGATCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAA < 2:566276/150‑1 GGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAA > 2:2002246/1‑150 GGCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATGGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGGCGTTCACGTGCTTTACTGACGACCTGCTCAA > 1:1503299/1‑150 GCGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAG > 1:56688/1‑150 GCGCGCAAGCCTTCCAAGCAACGCTTTAACGTAGTCCATCCCGATTGGGCGGCGATCGATGGCTTTGGACGGAATCATTTCGGGGGAGTCGAGCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAG > 2:1465442/1‑150 CGCGCAAGCCTTCCAAGCAACGCTTTACCGTTGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGA < 1:1984797/150‑1 CGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGA < 2:2396308/150‑1 CGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGA < 1:2002246/150‑1 CGCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCACGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGA < 2:2103906/150‑1 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGGAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGAT > 2:2027889/1‑150 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGAT > 2:2190255/1‑150 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGAT < 1:1524732/150‑1 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGAT > 1:718284/1‑150 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGAT < 2:246897/150‑1 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTA < 1:722148/131‑1 GCGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTA > 2:722148/1‑131 CGCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATG > 1:2356400/1‑150 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG < 2:2048569/150‑1 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG > 1:420107/1‑150 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG > 1:2168465/1‑150 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG > 2:615193/1‑150 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG < 2:714839/150‑1 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGT < 2:1849595/79‑1 GCAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGT > 1:1849595/1‑79 TGAACGACTGGACGGGATTTTCGTGCCGGGGATCGACCGCCACGAAATGCTCTCGACCACCGACATCGATCGCCGCGCAATCGGGATGGACGACGGTAAAGCGTTGCTTGGAAGGCTTGCGCGCCATGATGAATCCTCGCAGGATAAAGGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1296945‑1296790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgcAAGCCTTCCAAGCAACGCTTTACCGTCGTCCATCCCGATTGCGCGGCGATCGATGTCGGTGGTCGAGAGCATTTCGTGGCGGTCGATCCCCGGCACGAAAATCCCGTCCAGTCGTTCACGTCCTTTACTGACGACCTGCTCAAGATGG > NC_002947/1296828‑1296975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |