| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1409101 | 70 (0.750) | 14 (0.180) | 9/214 | NT | 17.8% | intergenic (+39/‑236) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit |
| ? | NC_002947 | = 1409127 | 69 (0.860) | intergenic (+65/‑210) | PP_1230/nadA | hypothetical protein/quinolinate synthase iron‑sulfur cluster subunit | |||||
TGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1408942‑1409101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgcCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTCGGCCATTGA < NC_002947/1409127‑1408983 TGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTTGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGG < 2:1660508/150‑1TGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAACTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGG < 1:1387506/150‑1 TGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGACGCAGGGGTTATGGTTTCTCCTGTTGCGGCCTCTTCGCCGGT > 2:124399/1‑150 CAGCCTTCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCG > 2:1603772/1‑150 CAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCG > 1:503325/1‑150 TGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCT > 2:1819971/1‑150 TGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGCAGCAGCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCTGGTGAACCCGCtact > 1:755899/1‑146 CACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTCGCGGCCTCTTCGCGG > 2:266910/1‑134 CACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTCGCGGCCTCTTCGCGG < 1:266910/134‑1 CGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAA > 1:706027/1‑150 GGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCTCCTACACTGTGAAATCC < 2:1778971/150‑1 ATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGC < 2:2227482/150‑1 ATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGCAGGAGC < 2:2227653/150‑1 ATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGC < 1:1819971/150‑1 TTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCCCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:706027/150‑1 TTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCATAGTGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 1:25710/150‑1 TCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGG < 1:38551/150‑1 GCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGG > 1:1301214/1‑65 GCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGG < 2:1301214/65‑1 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCC < 1:501880/68‑1 GCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCC > 2:501880/1‑68 GGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG > 1:1541473/1‑94 GGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:1541473/94‑1 CTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG > 1:324537/1‑87 CTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGG < 2:324537/87‑1 GCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTC > 2:534018/1‑83 GCAGGGAAGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTC < 1:534018/83‑1 CTTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGACCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATT > 1:1015035/1‑150 TTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCAC > 1:566117/1‑86 TTCGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCAC < 2:566117/86‑1 CGCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTT < 2:878961/150‑1 GCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTC < 1:1399566/150‑1 GCGGGTGAACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTC < 2:9226/150‑1 AACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAAC > 2:1445203/1‑70 AACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAAC < 1:1445203/70‑1 AACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGACCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTCGGCCATT < 2:1015035/150‑1 ACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACA < 2:1965908/115‑1 ACCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACA > 1:1965908/1‑115 CCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTCGGCCATTGA > 1:1603772/1‑150 CCCGCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTCGGCCATTGA > 1:1409176/1‑150 GCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCA > 2:1802523/1‑132 GCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCA < 1:1802523/132‑1 GCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGA > 2:1146405/1‑47 GCCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGA < 1:1146405/47‑1 TGTGGTCAGCAGCCTGCACTATGCCGATGGCATGGTCGATTTCAATGGCCGAAAAATGACCGTTGAAGAATTTGCCATGTTCATGGCGGCGCATCTGGGGGCCCTGTCGCCGCAGGGGTGATGGTTTCTCCTGTTGCGGCCTCTTCGCGGGTGAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1408942‑1409101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggtgaacccgcCCCTACACTGTGAAATCCTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCAACAGGAGAAACCATCACCCCTGCGGCGACAGGGCCCCCAGATGCGCCGCCATGAACATGGCAAATTCTTCAACGGTCATTTTTCGGCCATTGA < NC_002947/1409127‑1408983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |