New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1613744 =	73 (0.780)	4 (0.050)	4/236	NT	5.1%	coding (904/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase
	?	NC_002947	1613794 =	79 (0.900)					coding (854/1683 nt)	ushA	5'‑nucleotidase/2',3'‑cyclic phosphodiesterase

CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1613898‑1613744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcaTGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATTCAC  >  NC_002947/1613794‑1613942                                                                                                                                                                                                                                                                                                                  CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGC                                                                                                                                                            <  1:1173979/150‑1     CCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATAAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGC                                                                                                                                                        >  1:1738166/1‑150                                 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG                                                                                                                                                         <  2:2287190/121‑1                                 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG                                                                                                                                                         <  2:2286834/121‑1                                 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG                                                                                                                                                         >  1:2286834/1‑121                                 TAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGG                                                                                                                                                         >  1:2287190/1‑121                                                                                                        CATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAA                                                     >  1:460579/1‑150                                                                                                                  ATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTC                                                        >  1:2236666/1‑137                                                                                                                  ATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTC                                                        <  2:2236666/137‑1                                                                                                                             GTGGGTGACTTGAGCATCACTCAGGCTGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCC                                <  2:460579/150‑1                                                                                                                                                       TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT      >  2:1522763/1‑150                                                                                                                                                       TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT      >  2:2214095/1‑150                                                                                                                                                       TGGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCAT      <  2:2393587/150‑1                                                                                                                                                        GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCGTGCGTGTCTAACGGCTCGGCGGTATCCCCTCCCTGGAGGATTACCGCAATGATTGCATT     >  1:1943629/1‑150                                                                                                                                                        GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATT     <  1:1249419/150‑1                                                                                                                                                        GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCT                                                                           >  2:2154030/1‑80                                                                                                                                                        GGCATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCT                                                                           <  1:2154030/80‑1                                                                                                                                                           ATGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCCTGACCGCAATGATTGCATTGAC  >  1:318109/1‑150                                                                                                                                                                                                                                                                                                                  CGAGCCGTTCGACACGCAGGATTGCAGCCAGCTAAGTGGCACGATCGTCGACGTGGCGAAGCGGCTGGATCCTGCGGTAGATGCCGTCATCAGCGGCCACTCGCATGCCAGCTATCAATGCAAGGTGGGTGACTTGAGCATCACTCAGGCTGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1613898‑1613744 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcaTGCGAGTGGCCGCTGATGACGGCATCTACCGCAGGATCCAGCCGCTTCGCCACGTCGACGATCGTGCCACTTAGCTGGCTGCAATCCTGCGTGTCGAACGGCTCGGCGGTATCCCCTCCCTGGTGCATGACCGCAATGATTGCATTCAC  >  NC_002947/1613794‑1613942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.