| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1722478 | 88 (0.940) | 6 (0.070) | 6/242 | NT | 6.6% | coding (1069/3066 nt) | PP_1517 | RND family transporter |
| ? | NC_002947 | = 1722503 | 85 (0.940) | coding (1094/3066 nt) | PP_1517 | RND family transporter | |||||
TCGAGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1722326‑1722478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCGCCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGCTCACCAGCAGCACAATGACCAACGCCTCGACCAGCACCTGTACGAACTCGCCCACGCCGGCCTTCACCGCCGCCGGCTGATCCGAAACCTTGCGCAGCGCCATGCC < NC_002947/1722503‑1722355 TCGAGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGTGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGG < 2:440974/150‑1TCGAGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGG < 1:1037284/150‑1 GAGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCTAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGC > 2:184857/1‑150 AGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCC > 1:2442977/1‑150 GGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCAG > 1:1636773/1‑150 AGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGG < 1:1652979/105‑1 AGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGG > 2:1652979/1‑105 GGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGC < 2:1636773/150‑1 GTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTGCAGGTGCTGGTCGAGGCGTTGATCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCAG > 2:1231364/1‑132 GTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCAG < 1:1231364/132‑1 GTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCA > 1:1530146/1‑62 GTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCCAGCGCCACCACCAGGCCAGTGCGCA < 2:1530146/62‑1 CCAGCGCCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGCTCACCAGCAGCACAATGACCAACGCCTCGACCAGCACCTGTACGAACTCGCCCACGCCGGCCTTCACCGCCGCCGGCTGATCCGAAACCTTGCGCAGCGCCATGC > 1:2036367/1‑150 CCAGCGCCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGCTCACCAGCAGCACAATGACCAACGCCTCGACCAGCACCTGTACGAACTCGCCCACGCCGGCCTTCACCGCCGCCGGCTGATCCGAAACCTTGCGCAGCGCCATGC < 2:263878/150‑1 CAGCACCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGCTCACCAGCAGCACAATGACCAACGCCTCGACCAGCACCTGTACGAACTCGCCCACGCCGGCCTTCACCGCCGCCGGCTGATCCGAAACCTTGCGCAGCGCCATGCC < 2:617012/150‑1 TCGAGCGCCTGGCACATAACCTGCCTGCCGGCATGGCGCTGCGCAAGGTTTCGGATCAGCCGGCGGCGGTGAAGGCCGGCGTGGGCGAGTTCGTACAGGTGCTGGTCGAGGCGTTGGTCATTGTGCTGCTGGTGAGCTTCTTCTCGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1722326‑1722478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccAGCGCCACCACCAGGCCAGTGCGCAGGCCCAGCGAGAAGAAGCTCACCAGCAGCACAATGACCAACGCCTCGACCAGCACCTGTACGAACTCGCCCACGCCGGCCTTCACCGCCGCCGGCTGATCCGAAACCTTGCGCAGCGCCATGCC < NC_002947/1722503‑1722355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |