New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1787081 = | 73 (0.780) | 4 (0.050) | 4/238 | NT | 6.2% | intergenic (+6/‑176) | tsf/pyrH | elongation factor Ts/uridylate kinase |
? | NC_002947 | 1787143 = | 51 (0.570) | intergenic (+68/‑114) | tsf/pyrH | elongation factor Ts/uridylate kinase |
TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787233‑1787081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggggAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC > NC_002947/1787143‑1787289 tttgaaAAAATTCGTGCGGGCTGTTTGCCGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCATATAAACTCCTCCCCGTTTTGACAAAGTGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG < 2:1593083/144‑1 TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG > 1:2250084/1‑150 TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACG > 2:1800488/1‑150 TCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCC > 2:1807399/1‑150 TCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCT > 1:655767/1‑150 CGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAA < 2:655767/150‑1 GGCAGCCTCTTTGGGGCGACAGACGGGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCA < 1:1807399/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:1226517/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:1990722/150‑1 GGGAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC < 2:613240/150‑1 TTTTAGAAAATTCGTGCGGGCTGTTTGCAGCCTGCTAACTGTAGCGTGGCACCGCTTCGGTGCCAGCGAAGAGGGAGTCGTATAAACTCCTCCCCGTTTTGACAAAGAGGCTGCGCGCGTGAGCGGGCAGCCTCTTTGGGGCGACAGACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1787233‑1787081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggggAGGAGTTTATACGACTCCCTCTTCGCTGGCACCGAAGCGGTGCCACGCTACAGTTAGCAGGCTGCAAACAGCCCGCACGAATTTTCTAAAAGTACGCCGCAGGAGAGACTCGCAATGGCTCAGCAGGTGAGTGGTCGCCAACCTCGC > NC_002947/1787143‑1787289 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |