| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1799915 | 65 (0.700) | 10 (0.130) | 6/204 | NT | 14.9% | intergenic (+43/‑144) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha |
| ? | NC_002947 | = 1799957 | 61 (0.800) | intergenic (+85/‑102) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha | |||||
TACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1799747‑1799915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGAAGGAA < NC_002947/1799957‑1799809 TACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC > 1:642144/1‑150 CCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTC < 2:1832274/150‑1 CGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCGCGGTGCGGGCGGCTTGGGGCGGGCGCGAAGGCGTCACGCGCAT‑CCTGATCTGACCTATTGGGGCCCGTTCTCGGCCCTTgg > 1:257710/1‑148 CGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGAGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCG > 1:2344420/1‑150 GACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGC < 2:399853/150‑1 ACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCG < 2:1523172/150‑1 CCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGG < 2:1166831/150‑1 TGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGC < 2:1586681/150‑1 TCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGC > 1:1574001/1‑150 cgcGGCGTTGGCACGTCTTGGGCCTACGCCCTTTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCGTGCCCGCgaa < 1:1474208/147‑4 ACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGC > 1:224119/1‑150 ACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGC < 2:1871201/116‑1 ACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGC > 1:1871201/1‑116 TCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGA < 1:201012/150‑1 CCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAG > 1:321930/1‑150 CTTCGCCCCGGTGCGGGCGGTTTGGGAAGCTCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATAGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGC < 1:41152/150‑1 CTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGC < 2:224119/150‑1 tcCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGG > 2:895979/3‑91 tcCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGG < 1:895979/89‑1 CGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGG < 1:1888591/150‑1 CGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGACGCTCAGACCGATGAATCCTGTGAGAGCGGG < 2:14453/150‑1 GCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG < 2:321930/150‑1 GAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGA > 1:365366/1‑140 GAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGA < 2:365366/140‑1 GGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACC > 2:531348/1‑150 CGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAA < 1:2153354/134‑1 CGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAA > 2:2153354/1‑134 CCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCG > 1:2075308/1‑150 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGA > 1:2202311/1‑150 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGA > 2:561331/1‑150 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGA < 1:1507291/150‑1 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGAT > 2:237993/1‑37 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGAT < 1:237993/37‑1 CGCTACCACCCGCACTGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGAA < 2:61009/150‑1 CCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGAAGGAA < 1:1317319/150‑1 TACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAC‑CGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1799747‑1799915‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGCGGCCCCAATAGGTCAGATCAGGGAATCGGTGACGCCTTCGCGCGCTTCCCAAGCCGCCCGCACCGGGGCGAAGGAA < NC_002947/1799957‑1799809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |