New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2128264 = | 77 (0.830) | 4 (0.050) | 6/234 | NT | 5.6% | coding (3592/3873 nt) | PP_1887 | hypothetical protein |
? | NC_002947 | 2128288 = | 62 (0.710) | coding (3616/3873 nt) | PP_1887 | hypothetical protein |
CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2128420‑2128264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggatcATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC > NC_002947/2128288‑2128435 CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG > 2:2228159/1‑150 ATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGC < 1:339815/150‑1 CACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCG < 1:1345957/150‑1 CTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGA > 1:794191/1‑150 TGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGAT > 1:1720101/1‑150 GATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC > 2:712756/1‑150 GTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATNCCG < 2:1509660/150‑1 AAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG > 1:2397772/1‑115 AAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTG < 2:2397772/115‑1 GACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGC > 1:557136/1‑107 GACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCCGCCTGATGC < 2:557136/107‑1 ACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCC > 1:26645/1‑87 ACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCACAAATGAGCCGGATCATTCC < 2:26645/87‑1 ATCCGGCTCATTTGTGCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCA > 1:911781/1‑150 GCCGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGC < 1:2158772/150‑1 CGGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGGTCATGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCCTTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGCGGCGG > 1:2398984/1‑150 GGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGG < 2:1782557/150‑1 GGATCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGG > 1:1782557/1‑150 TCATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC > 1:1142593/1‑150 CATCACTGATCAGGTTGCCATTGCCGTCGTAATGCAAATCGATAGCCAACTGCGGATCGTATTTGACGATCTTGAACAACTCCTCCAGGTCGTGATCGACGTCATAGGTCTCCAGTAGCGCATCAGGCGGAATGATCCGGCTCATTTGTGCCGGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2128420‑2128264 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggatcATTCCGCCTGATGCGCTACTGGAGACCTATGACGTCGATCACGACCTGGAGGAGTTGTTCAAGATCGTCAAATACGATCCGCAGTTGGCTATCGATTTGCATTACGACGGCAATGGCAACCTGATCAGTGATGAGCAGGGGCGGGTAC > NC_002947/2128288‑2128435 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |