New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2202510 = | 75 (0.800) | 4 (0.050) | 4/236 | NT | 5.2% | coding (144/990 nt) | PP_1947 | hypothetical protein |
? | NC_002947 | 2202554 = | 74 (0.840) | coding (188/990 nt) | PP_1947 | hypothetical protein |
TCATCAGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202664‑2202510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccatgCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAAGTC > NC_002947/2202554‑2202702 TCAGCAGAACGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCGCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTT > 2:698713/1‑150 ATCAGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCC > 2:1733079/1‑150 AGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCCATG > 2:660590/1‑150 AGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCC < 1:1366153/147‑1 AGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCC > 2:1366153/1‑147 ATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACA > 1:1036099/1‑150 ATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCC < 2:1036099/150‑1 GCATGATCGCAACCGTGGGTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGAC > 1:7685/1‑79 GCATGATCGCAACCGTGGGTTCCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGAC < 2:7685/79‑1 CCATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGA < 2:2317508/150‑1 CATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGCGATACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAA < 1:2367864/150‑1 CATGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAA < 1:655887/150‑1 TGCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAAGT > 1:2334729/1‑150 GCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAAGTC < 1:2067180/150‑1 TCATCAGATCGGTAATGGGGGCATGTGCCAGTGCTGTACTCGTCAGGTAAACGACAAGGTCGTTGCTCGGGTCCAGGGCGCCCGAAACGATGGATGGAATAGGGTCCTGAGCATGGAAGGCGCGCGGTTGCATGATCGCAACCGTGGGTTCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2202664‑2202510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttccatgCTCAGGACCCTATTCCATCCATCGTTTCGGGCGCCCTGGACCCGAGCAACGACCTTGTCGTTTACCTGACGAGTACAGCACTGGCACATGCCCCCATTACCGATCTGATGATTGAGCATGAGCGCCGTTTCTTGCTCATGGAGGAAGTC > NC_002947/2202554‑2202702 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |