New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2408436 =	94 (1.010)	6 (0.070)	6/234	NT	6.6%	coding (172/1566 nt)	PP_2111	aerotaxis receptor
	?	NC_002947	2408461 =	83 (0.950)					coding (147/1566 nt)	PP_2111	aerotaxis receptor

CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2408592‑2408436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgccCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG  >  NC_002947/2408461‑2408608                                                                                                                                                                                                                                                                                                                   CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTG                                                                                                                                                             <  1:964701/150‑1     TTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGC                                                                                                                                                         <  2:1154781/150‑1       ACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGC                                                                                                                                                       <  1:878059/150‑1                                                 TCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGG                                                                                                                                                            >  1:493185/1‑103                                                 TCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGG                                                                                                                                                            <  2:493185/103‑1                                                                                                                                  ACGGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGA                                                                                           >  1:692764/1‑87                                                                                                                                  ACGGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGA                                                                                           <  2:692764/87‑1                                                                                                                                    GGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTG                                              >  1:2334997/1‑130                                                                                                                                    GGGCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTG                                              <  2:2334997/130‑1                                                                                                                                      GCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAG                                                                                                              >  1:1038859/1‑64                                                                                                                                      GCGCACCGCACAACCTGGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAG                                                                                                              <  2:1038859/64‑1                                                                                                                                                      GGTGCGCCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTA        <  1:581969/150‑1                                                                                                                                                            CCCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG  <  1:1318504/150‑1                                                                                                                                                             CCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGG                                             <  1:2258098/106‑1                                                                                                                                                             CCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGG                                             >  2:2258098/1‑106                                                                                                                                                                                                                                                                                                                   CCGATTACCCAGAGAGAACGGACTTTCCCAGCCCAGCAGCGGTTGATCTCCACTACCAACGCCAAGGGTGTGATCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGTTTCACCCGCGAGGAGCTGACGGGCGCACCGCACAACCTGGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2408592‑2408436 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgccCGTCAGCTCCTCGCGGGTGAAACCACTGATTTCGATAAAGGCATCGTTGCAGTAGGTGATCACACCCTTGGCGTTGGTAGTGGAGATCAACCGCTGCTGGGCTGGGAAAGTCCGTTCTCTCTGGGTAATCGGCTGGTTGTTACGCATG  >  NC_002947/2408461‑2408608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.