| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2618388 | 79 (0.850) | 6 (0.070) | 6/240 | NT | 7.3% | coding (99/288 nt) | PP_2291 | hypothetical protein |
| ? | NC_002947 | = 2618402 | 76 (0.850) | coding (113/288 nt) | PP_2291 | hypothetical protein | |||||
TCGAAATGGTGGTCCACCATGTCCTCGGATAGAGCAACCGAAAAGGAACTTGCAGTAGTCCACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2618272‑2618388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatc‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCCGA < NC_002947/2618402‑2618254 TCGAAATGGTGGTCCACCATGTCCTCGGATAGAGCAACCGAAAAGGAACTTGCAGTAGTCCACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑ACGCCTTCGCCGTCGAT < 1:726118/134‑1TCGAAATGGTGGTCCACCATGTCCTCGGATAGAGCAACCGAAAAGGAACTTGCAGTAGTCCACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑ACGCCTTCGCCGTCGAT > 2:726118/1‑134 ACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑ACGCCTTCGCCGTCGATG > 1:692265/1‑74 ACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑ACGCCTTCGCCGTCGATG < 2:692265/74‑1 GGGGTGTCCCCGTGACCATCGACGGCGAAGGCGT‑GATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGA > 1:1939281/1‑139 GGGGTGTCCCCGTGACCATCGACGGCGAAGGCGT‑GATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGA < 2:1939281/139‑1 ATC‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGGCATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCC > 2:769881/1‑150 ATC‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGG < 1:1645595/118‑1 ATC‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGG > 2:1645595/1‑118 TC‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCCG > 2:2337375/1‑150 C‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCCGA < 2:373157/150‑1 C‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACGCGTTGTGGACCACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCCGA < 1:401153/150‑1 TCGAAATGGTGGTCCACCATGTCCTCGGATAGAGCAACCGAAAAGGAACTTGCAGTAGTCCACAACGAGTTCGCCGTGTGGTGCCTCGAAATCATGCGGGGTGTCCCCGTGACCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2618272‑2618388‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatc‑ACGCCTTCGCCGTCGATGGTCACGGGGACACCCCGCATGATTTCGAGGCACCACACGGCGAACTCGTTGTGGACTACTGCAAGTTCCTTTTCGGTTGCTCTATCCGAGGACATGGTGGACCACCATTTCGAGTGCTTTAGGGAAGCCGA < NC_002947/2618402‑2618254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |