| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2619461 = | 75 (0.800) | 6 (0.070) | 6/238 | NT | 8.4% | intergenic (‑106/‑43) | PP_2292/PP_2293 | hypothetical protein/DNA maturase B |
| ? | NC_002947 | 2619490 = | 60 (0.680) | intergenic (‑135/‑14) | PP_2292/PP_2293 | hypothetical protein/DNA maturase B | |||||
TGTCGTATTGGACGGGGGTGGGTTCGGGGAGGTTGAGGTGTTTCCATACCAGGTAGATAAACTTTCGAAAGTCTTCCTGGGCGGGGTGAACTTTAACGCGGTCAGTCATACGGCAAAGGGACTCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2619612‑2619461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATACGACATCGCCCGATACCTGCAACACGGT > NC_002947/2619490‑2619635 TGTCGTATTGGACGGGGGTGGGTTCGGGGAGGTTGAGGTGTTTCCATACCAGGTAGATAAACTTTCGAAAGTCTTCCTGGGCGGGGTGAACTTTAACGCGGTCAGTCATACGGCAAAGGGACTCCTTGGGCCCGCGCAGGAGCGAG‑CCAA < 1:1935023/150‑1 GTGTTTCCATACCAGGTAGATAAACTTTCGAAAGTCTTCCTGGGCGGGGTGAACTTTAACGCGGTCAGTCATACGGCAAAGGGACTCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGG > 1:164793/1‑115 GTGTTTCCATACCAGGTAGATAAACTTTCGAAAGTCTTCCTGGGCGGGGTGAACTTTAACGCGGTCAGTCATACGGCAAAGGGACTCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGG < 2:164793/115‑1 TCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTAT < 1:2326211/97‑1 TCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTAT > 2:2326211/1‑97 TTGGGCCCGCGCAGGAGCGAGCCCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATA < 1:1397368/146‑1 TTGGGCCCGCGCAGGAGCGAGCCCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATA > 2:1397368/1‑146 GGGCCCGCGCAGGAGCGAG‑CCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAA < 1:2237967/75‑1 GGGCCCGCGCAGGAGCGAG‑CCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAA > 2:2237967/1‑75 CCAAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATACGACATCGCCCGATACCTGCAACACG > 1:2130587/1‑150 AAGGAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATACGACATCGCCCGATACCTGCAACACGGT > 2:2386059/1‑150 TGTCGTATTGGACGGGGGTGGGTTCGGGGAGGTTGAGGTGTTTCCATACCAGGTAGATAAACTTTCGAAAGTCTTCCTGGGCGGGGTGAACTTTAACGCGGTCAGTCATACGGCAAAGGGACTCCTTGGGCCCGCGCAGGAGCGAG‑CCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2619612‑2619461‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggAGTCCCTTTGCCGTATGACTGACCGCGTTAAAGTTCACCCCGCCCAGGAAGACTTTCGAAAGTTTATCTACCTGGTATGGAAACACCTCAACCTCCCCGAACCCACCCCCGTCCAATACGACATCGCCCGATACCTGCAACACGGT > NC_002947/2619490‑2619635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |