| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2743632 | 91 (0.980) | 6 (0.070) | 6/234 | NT | 6.8% | intergenic (+28/‑47) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein |
| ? | NC_002947 | = 2743653 | 79 (0.900) | intergenic (+49/‑26) | PP_2397/PP_2398 | EF hand domain‑containing protein/hypothetical protein | |||||
ACGATCGATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2743476‑2743632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaacgcCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCTCGG < NC_002947/2743653‑2743507 ACGATCGATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCC > 1:2229589/1‑150 CGATCGATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCA < 1:1986887/150‑1 TCGATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAA > 1:16079/1‑150 ATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGC < 1:2395480/150‑1 TCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACact > 2:1764582/1‑147 CCGAGCAGGAAGCGGCCGATCACCTCAAGGCGAGTTACCAGGCCAATGGCGAAGCCATGCCGGATGGTTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCCCCACCTGGCCAG‑CAGGAGGAGCG < 2:195093/150‑1 GGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCA > 1:2005925/1‑107 GGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCA < 2:2005925/107‑1 TCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCA > 1:2054391/1‑101 TCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCA < 2:2054391/101‑1 CAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCCCCACCTGGCCAG‑CAGGAGGA < 1:186090/104‑1 CAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCCCCACCTGGCCAG‑CAGGAGGA > 2:186090/1‑104 TGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCCCAACCTGGCCAG‑CAGGAGGAGC > 1:106192/1‑68 TGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGCCCAACCTGGCCAG‑CAGGAGGAGC < 2:106192/68‑1 CCATGAAACGCCACAACGCTCCTCCT‑GCTGGCCAGGTGGGGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCG > 1:1336766/1‑150 ACAACGCCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGC > 2:1736561/1‑150 CAACGCCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCT < 2:1810946/150‑1 CAACGCCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCT > 1:251067/1‑150 ACGCCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCTCG < 1:2233139/150‑1 CGCCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCTCGG > 1:596262/1‑150 ACGATCGATCGCAACCATGACGGTTTCATCTCCGAGCAGGAAGCGGCCGATCACCTCAAGGCGATTTACCAGGCCAATGGCAAAGCCATGCCGGATGGCTTGTTCAGCCACCTGACCGGCAAACCCTGACGTTCTACCCCATGAAACGCCACAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2743476‑2743632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaacgcCCCACCTGGCCAG‑CAGGAGGAGCGTTGTGGCGTTTCATGGGGTAGAACGTCAGGGTTTGCCGGTCAGGTGGCTGAACAAGCCATCCGGCATGGCTTTGCCATTGGCCTGGTAAATCGCCTTGAGGTGATCGGCCGCTTCCTGCTCGG < NC_002947/2743653‑2743507 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |