New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2765252 = | 68 (0.730) | 5 (0.060) | 5/238 | NT | 7.0% | noncoding (15/199 nt) | PP_mr33 | Cobalamin regulatory region |
? | NC_002947 | 2765283 = | 69 (0.780) | intergenic (‑17/+15) | PP_mr33/PP_2419 | Cobalamin regulatory region/membrane protein |
TGTGGCTGGGCGCGGTGCTGCTGGCGGTTGCGCTGTACCTGCCGGTGCGCGGGTTCGCCCGCCTGAAGCAGCGTCGCCGCGACATCCGTTGGCTGAAGTACTTCTGAAAAGCGTTTTCACCTGGCGGCGCG‑ATGGTCTACCATGCGGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2765404‑2765252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCACCGCGCCCAGCCACACCGCTGCAATACCGTCGAAACCGAA > NC_002947/2765283‑2765429 TGTGGCTGGGCGCAGTGCTGCTGGCGGTTGCGCTGTACCTGCCGGTGCGCGGGTTCGCCCGCCTGAAGCAGCGTCGCCGCGACATCCGTTGGCTGAAGTACTTCTGAAAAGCGTTTTCACCTGGCGGCGCG‑ATGGTCTACCATGCGGGCC > 2:755185/1‑150 CGGTGCTGCTGGCGGTTGCGCTGTACCTGCCGGTGCGCGGGTTCGCCCGCCTGAAGCAGCGTCGCCGCGACATCCGTTGGCTGAAGTACTTCTGAAAAGCGTTTTCACCTGGCGGCGCG‑ATGGTCTACCATGCGGGCCGCCAGGTGAAAA < 2:1048617/150‑1 CTGCTGGCGGTTGCGCTGTACCTGCCGGTGCGCGGGTTCGCCCGCCTGAAGCAGCGTCGCCGCGACATCCGTTGGCTGAAGTACTTCTGAAAAGCGTTTTCACCTGGCGGCCCGCATGGTAGACCAT‑CGCGCCGCCAGGTGAAAACGCTT < 2:2188145/150‑1 GCGCG‑ATGGTCTACCATGCGGGCCGCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGG < 1:732902/91‑1 GCGCG‑ATGGTCTACCATGCGGGCCGCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGG > 2:732902/1‑91 ATGCGGGCCGCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCACCGCGCCCAGCCACACCGCTGCAATACCGTC < 1:2188145/150‑1 GCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCACCGCGCCCAGCCACACCGCTGCAATACCGTCGAAACCGAA > 1:443126/1‑150 GCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCACCGCGCCCAGCCACACCGCTGCAATACCGTCGAAACCGAA < 2:188740/150‑1 GCCAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCAACGTCCGCAGCCACACCGCTGCAATACCGTCGAAACCGAA < 1:1145120/150‑1 TGTGGCTGGGCGCGGTGCTGCTGGCGGTTGCGCTGTACCTGCCGGTGCGCGGGTTCGCCCGCCTGAAGCAGCGTCGCCGCGACATCCGTTGGCTGAAGTACTTCTGAAAAGCGTTTTCACCTGGCGGCGCG‑ATGGTCTACCATGCGGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2765404‑2765252 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccAGGTGAAAACGCTTTTCAGAAGTACTTCAGCCAACGGATGTCGCGGCGACGCTGCTTCAGGCGGGCGAACCCGCGCACCGGCAGGTACAGCGCAACCGCCAGCAGCACCGCGCCCAGCCACACCGCTGCAATACCGTCGAAACCGAA > NC_002947/2765283‑2765429 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |