| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3011008 | 107 (1.150) | 8 (0.090) | 8/232 | NT | 7.6% | coding (26/1614 nt) | bcsG | endoglucanase |
| ? | NC_002947 | = 3011032 | 94 (1.090) | coding (50/1614 nt) | bcsG | endoglucanase | |||||
CTGGGCCTGGCCTTGTTGCTAGTGCGCCTGTGTTCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3010856‑3011008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccctcccAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCCGAACACA < NC_002947/3011032‑3010884 CTGGGCCTGGCCTTGTTGCTAGTGCGCCTGTGTTCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCT > 1:1446095/1‑150 tctTGGCCTTGTTGCTAGTGCGCCTGTGTTCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCCCCCTCaag < 1:1543021/147‑4 TTCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCACCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAG < 1:83017/150‑1 TCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGG < 1:1461821/150‑1 GCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCACCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACC > 1:2046397/1‑116 GCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCACCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACC < 2:2046397/116‑1 CCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGA > 2:358007/1‑114 CCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGA < 1:358007/114‑1 CCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCG < 1:1920149/110‑1 CCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCG > 2:1920149/1‑110 CACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGC > 2:702702/1‑150 CACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGC > 2:728149/1‑150 ACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCC < 1:423679/150‑1 ACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCC < 1:1575940/150‑1 ACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAA > 1:1317943/1‑146 ACCCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAA < 2:1317943/146‑1 CCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGCTTTAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCCGA > 1:523959/1‑150 CCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGC < 1:2317830/92‑1 CCTCCCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGC > 2:2317830/1‑92 CCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTG < 2:828198/41‑1 CCAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTG > 1:828198/1‑41 CAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCCGAACACA > 2:1936926/1‑150 CTGGGCCTGGCCTTGTTGCTAGTGCGCCTGTGTTCGGCATTACGTGGCGTGTTGCGCCGTCGCCTTCCCCCCCGTTACCTGAAACCGCTGGGCGTACGCCGCCGCGCTGCACGCCAGGAACCCCAGAATGACTAATACCACCATCACCCTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3010856‑3011008‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccctcccAGTCCAGGCCAGCGGGCCAGTACCGGGAGGGTGATGGTGGTATTAGTCATTCTGGGGTTCCTGGCGTGCAGCGCGGCGGCGTACGCCCAGCGGTTTCAGGTAACGGGGGGGAAGGCGACGGCGCAACACGCCACGTAATGCCGAACACA < NC_002947/3011032‑3010884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |