New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3081158 = | 75 (0.800) | 17 (0.190) | 13/234 | NT | 19.3% | coding (1400/1719 nt) | PP_2691 | hypothetical protein |
? | NC_002947 | 3081186 = | 72 (0.820) | coding (1372/1719 nt) | PP_2691 | hypothetical protein |
CTTCAGTGCTGCCGATGCGGAGCACTTCTTCTGGTACCGCTCAGCTGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGTGCCATAGCGCGCTGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3081313‑3081158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggaTATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCCCAGCCA > NC_002947/3081186‑3081334 CTTCAGTGCTGCCGATGCGGAGCACTTCTTCTGGTACCGCTCAGCTGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGTGCCATAGCGCGCT < 1:1165155/150‑1 AGTGCTGCCGATGCGGAGCACTTCTTCTGGTACCGCTCAGCTGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAATTGCATCTGGGTATCGCCCGCAATATCCAGCAGTGCCATAGCGCGCTGCTG < 1:1864979/150‑1 TGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGCGCGCTATGGCACTGCTGGATATTGCGGGC < 1:1759913/121‑1 TGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGCGCGCTATGGCACTGCTGGATATTGCGGGC > 2:1759913/1‑121 GCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGCGCGCTATGGCACTGCTGGATATTGCG > 2:458388/1‑106 GCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGCGCGCTATGGCACTGCTGGATATTGCG < 1:458388/106‑1 TATCCAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAG > 1:843462/1‑150 TCCAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTT > 1:1848616/1‑108 TCCAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTT < 2:1848616/108‑1 CAGNAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACT > 2:1501685/1‑150 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGGTACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACT > 2:1969128/1‑150 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCCGCGGAGCGGTACCAGAAGAAGTGCTCCGCCTCGGCAGCACT > 1:1840364/1‑150 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGACA > 1:1161743/1‑145 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGACA < 2:1161743/145‑1 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTT < 2:601180/105‑1 CAGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTT > 1:601180/1‑105 AGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGC < 2:1081364/110‑1 AGCAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGC > 1:1081364/1‑110 CAGTGCCATAGCGCGCTGCTGGATATTGCGGGCGTTATCGATCTGCATGTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAA < 2:1840364/150‑1 TGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCTGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCC < 2:2019602/150‑1 TGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCC > 1:188172/1‑150 TGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTC < 1:2145672/137‑1 TGCTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTC > 2:2145672/1‑137 CTGGATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCCCA > 1:915157/1‑150 CTGGATATTGCGGGCGATACCCAGCTGCATTGCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCCCA < 2:960473/150‑1 ATATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGCGCGGTCCCAGAAGAAGGCCTCCGCATCTGCAGCACCGGAGACCTACCGCCACGCCCACCCA > 2:107420/1‑150 CTTCAGTGCTGCCGATGCGGAGCACTTCTTCTGGTACCGCTCAGCTGAAAAAGAAGAGCCGCGCCTGGGCATTCGCGCAGAGGAGCCAGGAGCCGAAAAAGAAATGCAGCTGGGTATCGCCCGCAATATCCAGCAGTGCCATAGCGCGCTGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3081313‑3081158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggaTATTGCGGGCGATACCCAGCTGCATTTCTTTTTCGGCTCCTGGCTCCTCTGCGCGAATGCCCAGGCGCGGCTCTTCTTTTTCAGCTGAGCGGTACCAGAAGAAGTGCTCCGCATCGGCAGCACTGAAGTCGTAGCGCAACGCCCAGCCA > NC_002947/3081186‑3081334 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |