New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3316655 = | 77 (0.830) | 4 (0.050) | 4/238 | NT | 5.1% | coding (186/630 nt) | ribC | riboflavin synthase |
? | NC_002947 | 3316712 = | 76 (0.860) | coding (129/630 nt) | ribC | riboflavin synthase |
GCTTGATGTGACCACCTACCCGGGCCACAACCAGTTCACCATCGACCTCACCCCGGAACTGCTCGACGAGCTGAAAATCGGTGCCAGCGTCAGTGTCGAAGGTACCTGCCTGTCCGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3316805‑3316655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgacACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAGCAGAGGGCGGACGGCCTGGACGATGCCGGTGTACATGGAGTTGCTCCTGGG > NC_002947/3316712‑3316855 GCTTGATGTGACCACCTACCCGGGCCACAACCAGTTCACCATCGACCTCACCCCGGAACTGCTCGACGAGCTGAAAATCGGTGCCAGCGTCAGTGTCGAAGGTACCTGCCTGTCCGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGA > 2:2292093/1‑150 GCTTGATGTGAACACCTACCCGGGCCACAACCAGTTCACCATCGACCTCACCCCGGAACTGCTCGACGAGCTGAAAATCGGTGCCAGCGTAAGTGTCGCAGGTACCTGCCTGTCAGCGACCGAAATCGACGGCAGCCAAGTCAGGTTCGA > 2:572463/1‑150 CTTGATGTGACCACCTACCCGGGCCACAACCAGTTCACCATCGACCTCACCCCGGAACTGCTCGACGAGCTGAAAATCGGTGCCAGCGTCAGTGTCGAAGGTACCTGCCTGTCCGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGAC > 1:2009507/1‑150 GTCAGTGTCGAAGGTACCTGCCTGTCCGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCAC > 2:2086962/1‑150 GTCGAAGGTACCTGCCTGTCAGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAG > 1:675086/1‑150 CGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAGCAGAGGGCGGACGGCCTGGA < 1:2086962/150‑1 ATCGACGGCAGCCAAGTCAGGTTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAGCAGAGGGCGGACGGCCTGGACGATGCCGGT < 2:675086/150‑1 TTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAGCAGAGGGCGGACGGCCTGGACGATGCCGGTGTACATGGAGTTGCTCCTGGG > 2:112928/1‑150 TTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGG < 2:1483779/82‑1 TTCGACACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGACCCGGG > 1:1483779/1‑82 GCTTGATGTGACCACCTACCCGGGCCACAACCAGTTCACCATCGACCTCACCCCGGAACTGCTCGACGAGCTGAAAATCGGTGCCAGCGTCAGTGTCGAAGGTACCTGCCTGTCCGTGACCGAAATCGACGGCAGCCAAGTCAGGTTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3316805‑3316655 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgacACTGACGCTGGCACCGATTTTCAGCTCGTCGAGCAGTTCCGGGGTGAGGTCGATGGTGAACTGGTTGTGGCCCGGGTAGGTGGTCACATCAAGCAGAGGGCGGACGGCCTGGACGATGCCGGTGTACATGGAGTTGCTCCTGGG > NC_002947/3316712‑3316855 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |