New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3383608	62 (0.660)	10 (0.110)	9/250	NT	8.9%	coding (501/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 6172325	143 (1.530)					coding (33/1836 nt)	glmS	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase

ATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3383461‑3383608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAACGGTGAACTGCAGCGCCGCCGCCGCATCGGCAAGGTCAGCGAGCTGGAGGTTGCTGTTGC  <  NC_002947/6172325‑6172179                                                                                                                                                                                                                                                                                                         ATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTA                                                                                                                                                   >  1:267421/1‑150              AACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTCCACTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCAT                                                                                                                                      >  1:392111/1‑150                        AATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAA                                                                                                                            >  1:2214537/1‑150                                      GCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCT                                                                                                              <  2:1091169/150‑1                                                                   GCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTT                                                                                 >  1:421135/1‑150                                                                            CTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTAC                                                                        <  1:836030/150‑1                                                                                       GTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATAGATCTATTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAAC                                                             >  1:1205721/1‑150                                                                                       GTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAA                                                                                                                            >  1:1566018/1‑87                                                                                       GTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAA                                                                                                                            <  2:1566018/87‑1                                                                                                                       CTAATTTTTGCCTTATCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAACGGTGAACTGCAGCGCCGCCGCCGCATCGGCAA                             >  1:507564/1‑150                                                                                                                                      TCTCGGCATGACCCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAACGGTGAACTGCAGCGCCGCCGCCGCATCGGCAAGGTCAGCGAGCTGGA              <  2:507564/150‑1                                                                                                                                                  CCCTAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAACGGTGAACTGCAGCGCCGCCGCCGCATCGGCAAGGTCAGCGAGCTGGAGGTTGCTGTTGC  >  1:622804/1‑150                                                                                                                                                                                                                                                                                                         ATCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3383461‑3383608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAATATCACAGCCATCCTGATCGAAGGCCTTAAGCGTCTTGAATACCGCGGTTACGACAGCGCCGGTTTGGCTGTACTCACCCAGAACGGTGAACTGCAGCGCCGCCGCCGCATCGGCAAGGTCAGCGAGCTGGAGGTTGCTGTTGC  <  NC_002947/6172325‑6172179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.