| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3438482 | 63 (0.680) | 4 (0.040) | 4/240 | NT | 6.2% | coding (680/741 nt) | PP_3057 | pectinesterase |
| ? | NC_002947 | = 3438502 | 61 (0.680) | coding (700/741 nt) | PP_3057 | pectinesterase | |||||
CGGCTTTATGGCGGTGAAGTTTTACAACGTTGTCTTCTCTTTGCGTGGCACTTTCACCGGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3438330‑3438482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtTCGGGTCCTTGCCTGCCGCTACACCGTGGATCAGCGAGCCTTCAAGGGCTGCTGGAATTGTGCAGACCAGCGCGCTCAGAGAGAGACAAGGGAAAGTCGCGCCAACAATCTTCCCGGTGAAAGTGCCACGCAAAGAGAAGACAACGT < NC_002947/3438502‑3438356 CGGCTTTATGGCGGTGAAGTTTTACAACGTTGTCTTCTCTTTGCGTGGCACTTTCACCGGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGG > 1:124429/1‑150CGGCTTTATGGCGGTGAAGTTTTACAACGTTGTCTTCTCTTTGCGTGGCACATCCACCGGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGG > 1:1752510/1‑150 GGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGTTCGGGTCCTTGCCTGCCGCTACACC > 1:83800/1‑120 GGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGTTCGGGTCCTTGCCTGCCGCTACACC < 2:83800/120‑1 GATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGTTCGGGTCCTTGCCTGCCGCTACAC < 1:1045388/114‑1 GATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGTTCGGGTCCTTGCCTGCCGCTACAC > 2:1045388/1‑114 CTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGT > 1:1470617/1‑61 CTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGT < 2:1470617/61‑1 GGTGTTCGGGTCCTTGCCTGCCGCTACACCGTGGATCAGCGAGCCTTCAAGGGCTGCTGGAATTGTGCAGACCAGCGCGCTCAGAGAGAGACAAGGGAAAGTCGCGCCAACAATCTTCCCGGTGAAAGTGCCACGCAAAGAGAAGACAAC > 2:237923/1‑150 GTGTTCGGGTCCTTGCCTGCCGCTACACCGTGGATCAGCGAGCCTTCAAGGGCTGCTGGAATTGTGCAGACCAGCGCGCTCAGAGAGAGACAAGGGAAAGTCGCGCCAACAATCTTCCCGGTGAAAGTGCCACGCAAAGAGAAGACAACG > 1:2291782/1‑150 TGTTCGGGTCCTTGCCTGCCGCTACACCGTGGATCAGCGAGCCTTCAAGGGCTGCTGGAATTGTGCAGACCAGCGCGCTCAGAGAGAGACAAGGGAAAGTCGCGCCAACAATCTTCCCGGTGAAAGTGCCACGCAAAGAGAAGATAACGT > 1:1929361/1‑150 CGGCTTTATGGCGGTGAAGTTTTACAACGTTGTCTTCTCTTTGCGTGGCACTTTCACCGGGAAGATTGTTGGCGCGACTTTCCCTTGTCTCTCTCTGAGCGCGCTGGTCTGCACAATTCCAGCAGCCCTTGAAGGCTCGCTGATCCACGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3438330‑3438482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtTCGGGTCCTTGCCTGCCGCTACACCGTGGATCAGCGAGCCTTCAAGGGCTGCTGGAATTGTGCAGACCAGCGCGCTCAGAGAGAGACAAGGGAAAGTCGCGCCAACAATCTTCCCGGTGAAAGTGCCACGCAAAGAGAAGACAACGT < NC_002947/3438502‑3438356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |