| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3468076 = | 87 (0.930) | 6 (0.070) | 4/244 | NT | 6.8% | coding (671/1365 nt) | PP_3082 | membrane protein |
| ? | NC_002947 | 3468100 = | 79 (0.870) | coding (647/1365 nt) | PP_3082 | membrane protein | |||||
GCGAAATCACCCAGCTGGGCGATACCGCCCCGTTCATGCTGGCCGGCGTGCTGGCCGCCCTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3468226‑3468076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATCA > NC_002947/3468100‑3468247 GCGAAATCACCCAGCTGGGCGATACCGCCCCGTTCATGCTGGCCGGCGTGCTGGCCGCCCTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG > 1:305569/1‑150GCGAAATCACCCAGCTGGGCGATACCGCCCCGTTCATGCTGGCCGGCGTGCTGGCCGCCCTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG < 2:1688397/150‑1 CTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTNCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG > 1:1329830/1‑91 CTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG > 1:1325857/1‑91 CTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG < 2:1329830/91‑1 CTGTCGGTGTTGCCGATCGTGATCCTGACGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGG < 2:1325857/91‑1 CTCAAGCCCCGCCAGTTGCTGGGCGTGGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCG < 1:1006004/84‑1 CTCAAGCCCCGCCAGTTGCTGGGCGTGGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCG < 1:1006234/84‑1 CTCAAGCCCCGCCAGTTGCTGGGCGTGGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCG > 2:1006004/1‑84 CTCAAGCCCCGCCAGTTGCTGGGCGTGGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCG > 2:1006234/1‑84 AAGCCCCGCCAGTTGCTGGGCGTGTCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATC < 2:1288576/80‑1 AAGCCCCGCCAGTTGCTGGGCGTGGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATC > 1:1288576/1‑80 GGCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATC < 1:1089479/150‑1 GCTTGAGGGGTTCGACTTTGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATCA > 1:1623362/1‑150 GCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATCA > 1:1118281/1‑150 GCTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATCA < 2:801981/150‑1 GCGAAATCACCCAGCTGGGCGATACCGCCCCGTTCATGCTGGCCGGCGTGCTGGCCGCCCTGTCGGTGTTGCCGATCGTGATCCTGCCGCGGGTGTCGCCGCTGCTGGACCAAGTCGAACCCCTCAAGCCCCGCCAGTTGCTGGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3468226‑3468076‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTTGAGGGGTTCGACTTGGTCCAGCAGCGGCGACACCCGCGGCAGGATCACGATCGGCAACACCGACAGGGCGGCCAGCACGCCGGCCAGCATGAACGGGGCGGTATCGCCCAGCTGGGTGATTTCGCCAAGGCCAGCCTGGGCGATCA > NC_002947/3468100‑3468247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |