| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3585378 = | 76 (0.810) | 4 (0.050) | 3/232 | NT | 5.7% | coding (348/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase |
| ? | NC_002947 | 3585417 = | 61 (0.700) | coding (387/762 nt) | benD | 1,6‑dihydroxycyclohexa‑2,4‑diene‑1‑carboxylate dehydrogenase | |||||
GGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3585531‑3585378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCG > NC_002947/3585417‑3585565 GGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTG < 1:1519238/150‑1GGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTG > 2:2334916/1‑150 CGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTGGC > 2:1704706/1‑150 GGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCA > 2:1110070/1‑150 ACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTATGGCAGCGCGGCGTGGCAG < 1:597542/90‑1 ACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTATGGCAGCGCGGCGTGGCAG > 2:597542/1‑90 GACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGC > 1:1267060/1‑51 GACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGC < 2:1267060/51‑1 CACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAA > 1:828657/1‑150 CCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGC > 1:2214536/1‑150 CCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCA < 1:766615/100‑1 CCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCA > 2:766615/1‑100 GCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTG < 1:2202656/78‑1 GCAGTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTG > 2:2202656/1‑78 GTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCG < 2:227671/150‑1 GGCGGTTTCGAAGGCCAGGCAGGCAGTGAGCGCGTTGACGCCACCCTTGGCTGCGCCGTAAGGCACACGGTTGACGCCGCGGGTAGCGATGGACGAGACATTGACGATGGCGCCACTGCCACGCTCGAGCATGTACGGCAGCGCGGCGTGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3585531‑3585378‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtggcagTGGCGCCATCGTCAATGTCTCGTCCATCGCTACCCGCGGCGTCAACCGTGTGCCTTACGGCGCAGCCAAGGGTGGCGTCAACGCGCTCACTGCCTGCCTGGCCTTCGAAACCGCCGGCCGGGGCATCCGCGTCAACGCCACTGCGCCCG > NC_002947/3585417‑3585565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |