| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3588138 | 60 (0.640) | 6 (0.070) | 5/240 | NT | 11.6% | intergenic (+16/‑59) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
| ? | NC_002947 | = 3588208 | 34 (0.380) | coding (12/1272 nt) | benE‑II | benzoate transport protein | |||||
CTGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3587985‑3588138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCA < NC_002947/3588208‑3588132 CTGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATTAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGG < 1:418130/150‑1 TGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCGGCGGGCGGCCGCGCGCTTTGCAGGAGGCCTGATCCACCGAGTGGG > 1:260601/1‑150 TGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGG < 1:576785/150‑1 TGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGG < 2:58680/150‑1 GTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGG > 1:763007/1‑138 GTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGG < 2:763007/138‑1 TCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGTTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT < 1:2078539/150‑1 AGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCTAGCTTTGCAGGAGGCCTGATCCACCGAGTGG < 1:1075242/77‑1 AGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCTAGCTTTGCAGGAGGCCTGATCCACCGAGTGG > 2:1075242/1‑77 CAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCA < 2:1480870/150‑1 AGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACA > 1:2247713/1‑144 AGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACA < 2:2247713/144‑1 CAGGAGGCCTGATCCACCGAGTGGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT < 1:2243466/88‑1 CAGGAGGCCTGATCCACCGAGTGGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCAT > 2:2243466/1‑88 CTGGTCGGGGAGGTGGTGTTCGTCGAAGGGCCGGATGGTCGGCATGCCGAGCTGAAGTTCGACTTCCAGTTGCAGCAGGCCCAGGGCGGTGCCGATGAGCAGCGCAGCGGGCGGCCGCGAGCTTTGCAGGAGGCCTGATCCACCGAGTGGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3587985‑3588138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCA < NC_002947/3588208‑3588132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |