| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3588140 = | 60 (0.640) | 9 (0.110) | 8/210 | NT | 17.6% | intergenic (+18/‑57) | catA‑II/benE‑II | catechol 1,2‑dioxygenase/benzoate transport protein |
| ? | NC_002947 | 3588208 = | 34 (0.430) | coding (12/1272 nt) | benE‑II | benzoate transport protein | |||||
GGCCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3588304‑3588140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588208‑3588356 GGCCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTTTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGC < 1:1982918/150‑1 GCCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCG > 2:660451/1‑150 GCCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCG < 1:1327133/150‑1 GACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGC > 2:1067678/1‑150 AGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 1:1235568/143‑1 AGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTATGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG > 2:1235568/1‑143 AGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGA < 2:1568522/150‑1 CTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG > 1:125940/1‑134 CTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 2:125940/134‑1 TTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG > 1:1560217/1‑117 TTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGG < 2:1560217/117‑1 TTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG < 2:1399911/111‑1 TTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGG > 1:1399911/1‑111 TGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAACAGCCCACACCCAAACACGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTGCATGACAACGCTGAgctag > 1:1798131/1‑145 TTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGGTCACGGAC > 2:19737/1‑150 GCATGCCCGCTCCAACAACGACTGCACAGGCTTCGCCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTG > 2:1016198/1‑150 ATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTt > 1:1178633/1‑149 CCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGG > 1:511075/1‑150 CCGCTCCAACAACGACTGCACAGGCTCCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAA < 2:1776753/133‑1 CCGCTCCAACAACGACTGCACAGGCTCCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAA > 1:1776753/1‑133 GCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCC > 2:2150732/1‑150 GACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGG < 1:2150732/150‑1 GGAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCC > 2:1711369/1‑150 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCT > 1:1950253/1‑150 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGC < 2:1397124/128‑1 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGC > 1:1397124/1‑128 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGC < 2:1746473/70‑1 GAGCGGGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGC > 1:1746473/1‑70 GGCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCC > 1:452993/1‑150 GCATGCCCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCG < 1:1016198/150‑1 CCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGT > 2:1157778/1‑150 CCGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGAACTCCTACGCCGGCCCGT > 1:994754/1‑150 CGCGAAGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTT > 1:452768/1‑150 GAAGCAGCCAACACCCAAACAAGAGCACGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCACTCGTAGACGCATGAATGTCCACTTCGCTCTCCTACGCCGGCCCGTTGGT > 2:1204305/1‑150 AGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA < 1:1270311/150‑1 GGCCGACACAGAGCAGTCCTTGATCAGCGTTTTCATGAAGCTTCTCGCAAGGCAGCGGCCGGCCTTTGTGGCGGGCTCTTGTTTGGGTGTTGGCTGCTTCGCGGGCATGCCCGCTCCAACAACGACTGCACAGGCTTCACCTGTGGGAGCGGGCATGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3588304‑3588140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggcatgcccgcgaaGCAGCCAACACCCAAACAAGAGCCCGCCACAAAGGCCGGCCGCTGCCTTGCGAGAAGCTTCATGAAAACGCTGATCAAGGACTGCTCTGTGTCGGCCATCGTCGCCGGCAGCATTGCCACGACGATCTCCTACGCCGGCCCGTTGGTGA > NC_002947/3588208‑3588356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |