| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3723717 = | 78 (0.840) | 9 (0.100) | 9/232 | NT | 11.4% | intergenic (+4/+26) | PP_3288/PP_3289 | universal stress protein family protein/acetyltransferase |
| ? | NC_002947 | 3723739 = | 68 (0.790) | intergenic (+26/+4) | PP_3288/PP_3289 | universal stress protein family protein/acetyltransferase | |||||
AGTGCATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3723873‑3723717‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccttgtCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCATGCACTGAAAGCCATTGCGT > NC_002947/3723739‑3723887 AGTGCATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGCTTATTTTGCTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGc < 2:65812/150‑2 CATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGG < 1:58326/146‑1 CATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGG > 2:58326/1‑146 ATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTT > 2:2260464/1‑150 GGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTTGT > 1:2434639/1‑150 GGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTTGT > 2:227475/1‑150 GGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCCACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTTGT > 1:2434671/1‑150 CCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGG > 1:371694/1‑126 CCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGG < 2:371694/126‑1 GCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTACACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTC > 1:2264593/1‑128 GCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTACACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTC < 2:2264593/128‑1 ACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTT < 1:1221604/119‑1 ACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTT > 2:1221604/1‑119 GCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTCAA > 1:854988/1‑102 GCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTCAA < 2:854988/102‑1 CCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTCAA > 1:2063089/1‑96 CCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCGCAAGGGCCTTGTCTTTTCAA < 2:2063089/96‑1 ACAAGGCCCTTGCGGGCCTTGTCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACC > 2:2246883/1‑150 AAGGCCCTTGCGGGCCTTGTCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCAT > 2:1531942/1‑150 AAGGCCCTTGCGGGCCTTGTCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCAT > 2:1529640/1‑150 CTTGTCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCATGCACTGAAAGCCATT < 2:1863120/150‑1 GTCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCATGCACTGAAAGCCATTGCG > 2:39839/1‑150 TCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCATGCACTGAAAGCCATTGCGT > 2:620065/1‑150 AGTGCATGGTCTCCAGGGACCTGGCCAGCAACTACGCGATGCACCGGCTGGTCAAGGCACTGGGCTTCACCTCCCGCTACCCCGGCGGCGATGTGAGCGAGATTCTGCACGAACTTGACCTGCGGCCTTGAAAAGACAAGGCCCTTGCGGGCCTTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3723873‑3723717‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccttgtCTTTTCAAGGCCGCAGGTCAAGTTCGTGCAGAATCTCGCTCACATCGCCGCCGGGGTAGCGGGAGGTGAAGCCCAGTGCCTTGACCAGCCGGTGCATCGCGTAGTTGCTGGCCAGGTCCCTGGAGACCATGCACTGAAAGCCATTGCGT > NC_002947/3723739‑3723887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |