| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3854830 = | 70 (0.750) | 4 (0.050) | 4/238 | NT | 5.8% | coding (417/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase |
| ? | NC_002947 | 3854861 = | 63 (0.710) | coding (386/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase | |||||
ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3854982‑3854830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > NC_002947/3854861‑3855008 ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGGGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCC > 1:1202886/1‑150 CGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGG > 1:377786/1‑150 AGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGC > 1:712272/1‑97 AGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGC < 2:712272/97‑1 CTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTG < 1:2017897/75‑1 CTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTG > 2:2017897/1‑75 GGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAA > 1:1807815/1‑88 GGCGCGGGACAAGCGTGCAGCGGCCGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAA < 2:1807815/88‑1 CGGCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATC > 1:830127/1‑150 GCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > 1:2180994/1‑150 GCAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC < 2:1869870/150‑1 ATCGGTCCAGGTGACGTGCAGTGGATGACGGCGGCCAACGGCATCATTCATGAGGAGTTTCATTCCCCCGACTTTGCACGCAGTGGCGGCACGCTGGAAATGGTCCAGCTGTGGGTGAACCTGCCGGCGCGGGACAAGCGTGCAGCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3854982‑3854830‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcAGGTTCACCCACAGCTGGACCATTTCCAGCGTGCCGCCACTGCGTGCAAAGTCGGGGGAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCAC > NC_002947/3854861‑3855008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |