New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3914719	97 (1.040)	6 (0.070)	5/238	NT	5.9%	coding (112/702 nt)	PP_3454	transcriptional regulator
	?	NC_002947	= 3914743	99 (1.110)					coding (88/702 nt)	PP_3454	transcriptional regulator

CCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3914566‑3914719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccag‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCATGCT  <  NC_002947/3914743‑3914595                                                                                                                                                                                                                                                                                                                    CCTGGTCATGGTTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGT                                                                                                                                                              <  1:1012312/150‑1  CTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTC                                                                                                                                                             >  2:1940589/1‑150     GTCATGGCTATCTTCCCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAG                                                                                                                                                          <  1:805660/150‑1           GCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAG‑‑‑GTGATC                                                                                                                                                 >  1:302270/1‑150                                     GGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAG‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGA                                                                                                                       <  2:302270/150‑1                                        TTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGGCCAGGTCAGGCCTTTGCCGTCGGTACTCATCCAT‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTA                                                                                                                    <  1:1864980/150‑1                                                                      GCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACGTGATCGCCCGGGGCGATCATGTGCTGGACGA                                                                                                                       <  1:1312499/120‑1                                                                      GCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACGTGATCGCCCGGGGCGATCATGTGCTGGACGA                                                                                                                       >  2:1312499/1‑120                                                                                                                                    CTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCA‑‑‑CCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGC                        >  1:1398958/1‑150                                                                                                                                                     GTCCAG‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTC       <  1:840674/150‑1                                                                                                                                                       CCAG‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCAT     <  2:106864/150‑1                                                                                                                                                       CCAG‑‑‑GGGATCGCCCGGGGCGAGCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCAT     <  2:105232/150‑1                                                                                                                                                         AG‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCATGC   >  1:750412/1‑150                                                                                                                                                          G‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCATGCT  <  2:490118/150‑1                                                                                                                                                                                                                                                                                                                    CCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3914566‑3914719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccag‑‑‑GTGATCGCCCGGGGCGATCATGTGCTGGACGAGTACCGTCGGCAAAGGCCTGACCTGGTCATCCTTGACCTGATGCTGCCGGGCATCGATGGCCTGCAGCTGTGCCGGCTGCTGCGCCAGGAGTCGCAGACCCTGCCAATCCTCATGCT  <  NC_002947/3914743‑3914595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.