New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3919334	76 (0.810)	7 (0.080)	7/232	NT	8.8%	coding (3072/3129 nt)	mexB	multidrug resistance protein MexB
	?	NC_002947	= 3919346	75 (0.870)					coding (3084/3129 nt)	mexB	multidrug resistance protein MexB

GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3919182‑3919334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC  <  NC_002947/3919346‑3919200                                                                                                                                                                                                                                                                                                              GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC                                                                                                                                                        <  1:1338094/150‑1    TTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG                                                                                                                                                     >  2:1468552/1‑150                          TGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATC                                                                                                                               <  1:1802918/150‑1                                            CAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC                                                                                                                                  >  1:2056596/1‑129                                            CAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC                                                                                                                                  <  2:2056596/129‑1                                                                       GCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCAT                                                                                                                                >  2:2379366/1‑104                                                                       GCACCGGGGTGATCGGCGGCATGCTCAGCGACACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCAT                                                                                                                                <  1:2379366/104‑1                                                                                TGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACC                                                                                                                            >  1:385707/1‑99                                                                                TGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACC                                                                                                                            <  2:385707/99‑1                                                                                                                                                 ATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAG        >  1:183672/1‑150                                                                                                                                                  TGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCAAGAGGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGG       <  1:1839419/150‑1                                                                                                                                                   GCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGG                                                                                        >  1:2350421/1‑68                                                                                                                                                   GCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGG                                                                                        <  2:2350421/68‑1                                                                                                                                                       CTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC  >  2:1163431/1‑150                                                                                                                                                       CTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGAAGGCCAGGGGCAC  >  2:135426/1‑150                                                                                                                                                                                                                                                                                                              GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3919182‑3919334 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGCAC  <  NC_002947/3919346‑3919200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.