| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4344327 = | 61 (0.650) | 6 (0.080) | 6/212 | NT | 9.9% | intergenic (+14/‑142) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein |
| ? | NC_002947 | 4344385 = | 57 (0.720) | intergenic (+72/‑84) | PP_3817/PP_3818 | polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein | |||||
AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4344494‑4344327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggcaggcgctgcaCTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGC > NC_002947/4344385‑4344532 AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTC > 2:1138006/1‑150AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTC > 2:1137915/1‑150 GCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCTCCTAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATC < 1:1730320/150‑1 GCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCNATC < 2:1508187/150‑1 AGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGG < 2:2384921/150‑1 AGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGG > 1:1278219/1‑150 GACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGC < 1:641093/150‑1 AAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGG > 2:1985361/1‑150 gctGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCG > 2:2034633/4‑150 GATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTG < 2:838780/77‑1 GATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTG > 1:838780/1‑77 TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATC < 2:1294580/80‑1 TGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATC > 1:1294580/1‑80 CCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCA < 1:1528431/82‑1 CCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCA > 2:1528431/1‑82 TCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACCCTATGCCACAGGTCACCCGGCAT > 2:506086/1‑128 TCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACCCTATGCCACAGGTCACCCGGCAT < 1:506086/128‑1 TCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGC > 1:1756340/1‑109 TCTGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGC < 2:1756340/109‑1 TGGCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGG < 1:895745/150‑1 GCAGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCT > 2:1765648/1‑150 AGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCGCAGTTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGA > 1:147574/1‑150 AGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGA > 1:36034/1‑150 AGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGA > 2:1435859/1‑150 AGGCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGA > 2:2135641/1‑150 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGC < 2:36034/150‑1 GCGCTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGC < 1:98326/150‑1 CTGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCC > 2:1644274/1‑150 TGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCT > 2:2316955/1‑150 TGCACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCT > 2:618522/1‑150 CACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGC < 2:1290509/150‑1 CACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGC > 2:382842/1‑150 CACTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGC < 2:1290395/150‑1 AGCAGCAAGACAAGCAGGCGGAGCATGCCGGGTGACCTGTGGCATAGAGTTGGCCGGCAGATTACGACAGTGGCGTGATGATAATGTGACGGGGCGTACGCCTCCAATAGTGCAGCGCCTGCCAGATCGTGTGCCGCGCGGGCGGTGCTCGATCTGGCAGGCGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4344494‑4344327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatctggcaggcgctgcaCTATTGGAGGCGTACGCCCCGTCACATTATCATCACGCCACTGTCGTAATCTGCCGGCCAACTCTATGCCACAGGTCACCCGGCATGCTCCGCCTGCTTGTCTTGCTGCTCACCCTGCTACCACTCGCGACCCTGGCTGAGCCCCTGC > NC_002947/4344385‑4344532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |