| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4365329 | 89 (0.950) | 5 (0.060) | 5/236 | NT | 6.0% | coding (74/1098 nt) | PP_3842 | hypothetical protein |
| ? | NC_002947 | = 4365352 | 73 (0.830) | coding (97/1098 nt) | PP_3842 | hypothetical protein | |||||
CAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4365174‑4365329‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcaTCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCTGCTC < NC_002947/4365352‑4365204 aAATATTTAAGTTAAAAATCCTTGACTGAAGAGCAGGCTCTACACCTTTGACTGAGCCCATTATTCAAACACGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGAAACGGATTTGTGGGGCAAAATTTGCTGGCCGGTCTTAC > 2:1108233/2‑150CAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTAC > 2:65012/1‑150 TACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGNAAG < 2:1505359/150‑1 CATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGC > 1:2118497/1‑123 CATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGC < 2:2118497/123‑1 TTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGT > 1:240280/1‑90 TTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGT < 2:240280/90‑1 TGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGG < 1:961664/129‑1 TGCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGG > 2:961664/1‑129 GCGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCT < 1:1478655/150‑1 CGCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCTG < 1:362935/150‑1 GCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCC < 1:75427/58‑1 GCATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCC > 2:75427/1‑58 ATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAACCAAGGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCTGCTC > 1:2275067/1‑150 ATCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCTGCTC > 1:253364/1‑150 CAATATTCACGTTAAAAATCCTTGACTGTAGAGCAGGCTCTACACCTTAGCCTGCGCCCATCATTCAAACAAGGGTTCAAACATGAGTGTGGAGTGCTTTGTCACCGGCGGCAGCGGCTTTGTGGGGCAACATTTGCTGGCCGGTCTTACTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4365174‑4365329‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcaTCAGCACCCAGGTCTTGTGCCCTTGCGCAGTAAGACCGGCCAGCAAATGTTGCCCCACAAAGCCGCTGCCGCCGGTGACAAAGCACTCCACACTCATGTTTGAACCCTTGTTTGAATGATGGGCGCAGGCTAAGGTGTAGAGCCTGCTC < NC_002947/4365352‑4365204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |