| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4537562 = | NA (NA) | 13 (0.150) | 8/240 | NT | 32.6% | coding (853/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | = 4626671 | 28 (0.300) | coding (879/1533 nt) | PP_4091 | transposase | |||||
GCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGgc‑‑‑tgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537710‑4537562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGACCG < NC_002947/4626671‑4626520 GCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGG < 2:1933691/150‑1 CTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC < 2:2412122/150‑1 TTCGACGAATTTACGCCGGACATGCGGAACGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑T > 1:664489/1‑150 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑T > 1:2193724/1‑150 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑T < 2:580572/150‑1 TTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑T > 2:55302/1‑150 TCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTCGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TG < 1:1594510/150‑1 TCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TG < 1:1689728/150‑1 CGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TGG < 2:1361124/150‑1 GATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGC‑CTGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA < 1:2259603/138‑1 GATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGC‑CTGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA < 1:2259720/138‑1 GATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGC‑CTGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA > 2:2259603/1‑138 GATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGC‑CTGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCA > 2:2259720/1‑138 CTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATT > 1:1653735/1‑150 CTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATT > 2:2349257/1‑150 CTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TGGTGGTGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATT > 2:2209223/1‑150 CTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGT > 2:824553/1‑150 TCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTC > 1:579116/1‑136 TCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTC < 2:579116/136‑1 AGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTC > 2:2344617/1‑150 AGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTCCGGCGTAAATTCGTCGAA < 1:2344617/150‑1 AGCGGCACCTCCTGCGCGCGGC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAG < 1:824553/150‑1 ccttC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGAACGATGATTATGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAA < 2:1841546/146‑1 C‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGACC < 2:198569/150‑1 TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGACCG > 2:780797/1‑150 TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGG > 2:2402415/1‑142 TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGG < 1:2402415/142‑1 GA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGC < 2:168026/94‑1 GA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGC > 1:168026/1‑94 GCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGgc‑‑‑tgg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4537710‑4537562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GC‑‑‑TGGA‑‑‑GGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCATGTTCGGCGTAAATTCGTCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGACCG < NC_002947/4626671‑4626520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |