| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4547890 | 92 (0.990) | 6 (0.070) | 5/238 | NT | 6.3% | coding (158/1440 nt) | pydB | bifunctional D‑hydantoinase/dihydropyrimidinase |
| ? | NC_002947 | = 4547894 | 90 (1.010) | coding (162/1440 nt) | pydB | bifunctional D‑hydantoinase/dihydropyrimidinase | |||||
CCCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4547737‑4547890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGGA < NC_002947/4547894‑4547746 CCCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGA < 1:772678/150‑1CCCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGA < 1:802984/150‑1CCCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGAAGGATGCGGCCAGTACCTGA < 1:1901480/150‑1 CCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAACCCTAGACCAGACCACCGACAACTGGAGCCTCGAGGGCAGCGGCCAGTACCTGAT > 2:260664/1‑150 CCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGAT < 2:160976/150‑1 CTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATG > 2:1013137/1‑150 TCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAACCTTCTAGCCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCCCAG < 2:920311/150‑1 GCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGAT > 1:2130981/1‑79 GCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGAT < 2:2130981/79‑1 TCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCCCAGGCATCAG > 2:988277/1‑79 TCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCCCAGGCATCAG < 1:988277/79‑1 AAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCC > 2:1324641/1‑63 AAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCC < 1:1324641/63‑1 CACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCCCAGGCATCAG > 2:1332423/1‑57 CACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCCCCCAGGCATCAG < 1:1332423/57‑1 CAGTACCTGATGCCTGGGGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAG < 1:89462/74‑1 CAGTACCTGATGCCTGGGGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAG > 2:89462/1‑74 CCCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGG > 2:2268865/1‑150 CCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGGA > 1:1013137/1‑150 CCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGGA < 2:888955/150‑1 CCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGGA < 2:889005/150‑1 CCCTGTTGATCCGTGGCGCCACCGTGGTTACCCACGAAGAGAGTTACCCCGCCGATGTCCTGTGTGCCGATGGCCTGATCCGTGCCATCGGGCAAAACCTCGAACCGCCCACCGACTGCGAGATCCTCGACGGCAGCGGCCAGTACCTGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4547737‑4547890‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccCCCAGGCATCAGGTACTGGCCGCTGCCGTCGAGGATCTCGCAGTCGGTGGGCGGTTCGAGGTTTTGCCCGATGGCACGGATCAGGCCATCGGCACACAGGACATCGGCGGGGTAACTCTCTTCGTGGGTAACCACGGTGGCGCCACGGA < NC_002947/4547894‑4547746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |