New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4551237 | 84 (0.900) | 7 (0.080) | 6/236 | NT | 8.0% | coding (562/1275 nt) | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
? | NC_002947 | = 4551255 | 82 (0.930) | coding (580/1275 nt) | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
GTTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4551082‑4551237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccc‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC < NC_002947/4551255‑4551108 tTTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGAAATATGTGGAAATGGACACCTGCTTGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACCTCACCGGTATCCGCCAGT > 2:1262839/2‑150 TTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTCGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTC < 1:1160155/150‑1 TGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCG < 1:170737/150‑1 CCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGG < 1:2166387/149‑1 CCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGG > 2:2166387/1‑149 CCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCC > 1:380952/1‑150 ATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGCC < 1:1926480/150‑1 CCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGC < 1:2056639/115‑1 CCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGC > 2:2056639/1‑115 GGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGG > 1:2041973/1‑121 GGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGG < 2:2041973/121‑1 TGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGC > 1:1932554/1‑83 TGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑CGCCTCG‑ATGCGCGGCGCGGGC < 2:1932554/83‑1 ACCGATATCCGCCAGTCGGCCCGCGCCGCGCAT‑CGAGGCG‑GGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCC > 2:1375415/1‑141 ACCGATATCCGCCAGTCGGCCCGCGCCGCGCAT‑CGAGGCG‑GGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCC < 1:1375415/141‑1 cCCC‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATG > 2:1265154/2‑150 CC‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC > 1:1885380/1‑150 GTTGCCCGCACGGTATGCCGGAGCGCGGCATGGGGGCGGCCGTCGGCCAGGTGCCGGAATATGTGGAAATGGTCACCCGCTGGTGCAAGACGTACTGCGCGCTGCCGGTGATCGTGAAGCTTACGCCGAACATCACCGATATCCGCCAGTCGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4551082‑4551237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggccc‑CGCCTCG‑ATGCGCGGCGCGGGCCGACTGGCGGATATCGGTGATGTTCGGCGTAAGCTTCACGATCACCGGCAGCGCGCAGTACGTCTTGCACCAGCGGGTGACCATTTCCACATATTCCGGCACCTGGCCGACGGCCGCCCCCATGCC < NC_002947/4551255‑4551108 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |